Chenopodium album (lamb's quarters): 145619196
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Entry
145619196 CDS
T11950
Symbol
LOC145619196
Name
(RefSeq) bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic-like
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
calb Chenopodium album (lamb's quarters)
Pathway
calb00740
Riboflavin metabolism
calb00790
Folate biosynthesis
calb01100
Metabolic pathways
calb01110
Biosynthesis of secondary metabolites
calb01240
Biosynthesis of cofactors
Module
calb_M00125
Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:
calb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
145619196 (LOC145619196)
00790 Folate biosynthesis
145619196 (LOC145619196)
Enzymes [BR:
calb01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
145619196 (LOC145619196)
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
145619196 (LOC145619196)
SSDB
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Paralog
GFIT
Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
Motif
Other DBs
NCBI-GeneID:
145619196
NCBI-ProteinID:
XP_081529963
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Position
27:complement(33247161..33252524)
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AA seq
560 aa
AA seq
DB search
MASVYLSPPSAALCNSQASKNYESWNGLYSTKVSLAGGLKSNLAMVCLGSKSLRKVKGNF
RTRAAIVSGEGDLLSYSNNNGMLNQNAFDNDQSLGIERQADTVSLGALSADTAPTSAGFA
AENDECDLDRPTEGFSSIAEAIEDVRQGKMVIVVDDEDRENEGDLIMAAELATPEAMAFF
VKHGTGIVCVSMKEDDLSRLQLPLMVKDNEDKLCTAFTVTVDAKHGTTTGVSARDRATTV
KALASRDSKPEDFNRPGHIFPLKYKEGGVLKRAGHTEASVDFAMLAGLNPVAVICEIVDD
DGSMARLPRLREFAQKENLKIVSIADLIRYRRKRAQLVERSSAARIPTMWGPFTAYCYKS
YLDGIEHIAMVKGEIGDGQDILVRVHSECLTGDIFGSARCDCGNQLALAMKQIEAAGRGA
LVYLRGHEGRGIGLGHKLRAYNLQDAGRDTVEANEELGLPVDSREYGIGAQILRDLGIRT
MKLMTNNPAKYIGLKGYGLAVSGRVPLITPITSENKRYLETKRKKMGHVYGLDLISNGSS
PKTENGKPSTTSSPDTAVNL
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgtctatctctctcctccttctgctgctctctgcaattcacaagctagtaaa
aactatgaatcgtggaatgggttgtatagcacaaaggttagcttggctggaggattgaaa
tcgaatttagccatggtttgtttagggagtaaatcattgcgcaaagtcaagggaaatttt
agaaccagggctgctattgtttctggagaaggtgatttattgtcttactccaacaacaat
ggtatgttgaaccaaaatgcatttgacaatgatcaatcccttggaattgagaggcaagcc
gatactgtatctttgggggcactttctgcggatactgcacctacgtctgcagggtttgca
gcagaaaatgatgagtgtgatttagatcgcccaactgaaggtttttcttccattgccgag
gctattgaagatgttcgtcaaggaaagatggtgattgttgttgatgatgaagacagggag
aatgaaggagatctgataatggctgcagaattagcaacacctgaggctatggcctttttt
gtgaagcatggaactgggattgtttgtgtgagcatgaaagaagatgatctgtcaagactg
cagctccctctcatggtcaaagataatgaggacaaactgtgtacagcatttacagttaca
gtggatgcaaaacatggtacgaccactggtgtgtcagctcgtgatcgggcaactactgta
aaggccctggcatcgagggactccaagcctgaggactttaaccgccctggccatatcttt
ccattgaagtataaagagggcggtgttctgaagagagctggacacactgaagcttctgtt
gattttgctatgttagctggattaaatcccgttgcagttatctgtgagattgtggatgat
gatggctcaatggctagattgcctaggcttcgtgaatttgcacagaaggaaaacctcaaa
atagtctctattgcagatctaataaggtatcggagaaaaagagcccaattagttgaacgt
tcttctgctgctaggatccctacaatgtgggggcctttcacagcttattgttacaagtca
tacctggatggcattgagcatattgcaatggttaagggagaaataggagatggacaagat
atcctagtgagagttcattcagaatgccttacaggagatatatttggttcagctagatgt
gactgtggaaaccagcttgcacttgcaatgaagcaaatagaggctgctggaaggggagcg
ttggtctaccttcgtgggcatgaaggcaggggaattggtttgggccataagcttcgtgca
tataatctgcaagatgctggccgtgatactgttgaagccaatgaggagctaggattaccg
gttgactcaagagaatatggaattggtgcacagatattaagggatttgggaattagaaca
atgaagctgatgacaaacaatcctgcaaaatatatagggctgaagggttatggtcttgct
gtatctgggagagtgccacttatcactccaataaccagtgagaataagagatatttggaa
acaaagcgtaagaagatgggtcatgtctatggcctagacctaattagcaatggaagcagt
ccaaagactgaaaatggcaaacccagcacaaccagttcaccagatactgcagttaactta
tag
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