Chenopodium album (lamb's quarters): 145619466
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Entry
145619466 CDS
T11950
Symbol
LOC145619466
Name
(RefSeq) replication factor C subunit 2-like isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
calb Chenopodium album (lamb's quarters)
Pathway
calb03030
DNA replication
calb03410
Base excision repair
calb03420
Nucleotide excision repair
calb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
calb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
145619466 (LOC145619466)
03410 Base excision repair
145619466 (LOC145619466)
03420 Nucleotide excision repair
145619466 (LOC145619466)
03430 Mismatch repair
145619466 (LOC145619466)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
calb03032
]
145619466 (LOC145619466)
03036 Chromosome and associated proteins [BR:
calb03036
]
145619466 (LOC145619466)
03400 DNA repair and recombination proteins [BR:
calb03400
]
145619466 (LOC145619466)
DNA replication proteins [BR:
calb03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
145619466 (LOC145619466)
DNA Replication Termination Factors
ELG1-RFC complex
145619466 (LOC145619466)
Chromosome and associated proteins [BR:
calb03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
145619466 (LOC145619466)
DNA repair and recombination proteins [BR:
calb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
145619466 (LOC145619466)
Check point factors
HRAD17(Rad24)-RFC complex
145619466 (LOC145619466)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_lid_RFC1
RCF1-5-like_lid
AAA_22
Rad17
RuvB_N
AAA_16
AAA_5
AAA_11
AAA_assoc_2
Mg_chelatase
SLFN-g3_helicase
nSTAND3
ResIII
AAA_2
AAA_24
AAA_14
nSTAND_NTPase5
PhoH
AAA_19
AAA_28
DNAX_ATPase_lid
AAA_7
AAA_30
AAA_25
RNA_helicase
Parvo_NS1
bpMoxR
NPHP3_N
ATPase_2
DUF815
AAA_18
TIP49
NB-ARC
TIP49_C
Motif
Other DBs
NCBI-GeneID:
145619466
NCBI-ProteinID:
XP_081530286
LinkDB
All DBs
Position
27:21362797..21375969
Genome browser
AA seq
340 aa
AA seq
DB search
MAPLIQSSQPWVEKYRPKQVKDVAHQDEVIRVLTNTLETTNCPHMLFYGPPGTGKTTTAL
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGSAQRAGGYPCPPYKIII
LDEADSMTEDAQNALRRTMEPYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPKGIMK
SRILHICGEEGINLDSQALSTLSSISQGDLRRAITFLQGAARLYGSSISSKDLISVSGVI
PEEVVQDLLAACKSGNFDLADKAVNNVISEGYPVSQMISQLFDIIVEANDLSDEHKARIF
KKLGDTDKCLVDGADEYLQLLDVGGNIMRAFCNMAQDFSN
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggcgccattgatacaaagctcccaaccttgggttgaaaaatatcggccgaagcaagtg
aaggatgttgcacaccaagatgaagtcattcgagttcttaccaacaccctcgaaaccacc
aattgtcctcatatgctattctatggtccgcctggaaccggaaaaaccaccacagctctt
gccattgctcatcagcttttcgggcctgaactctacaagtccagggtgcttgagttgaat
gctagtgatgatcgtggtattaatgttgttcgtacaaaaatcaaaaattttgctgctgtt
gctgtaggctctgcacaacgagcggggggttatccttgtccaccttataaaattatcatt
ctagacgaggcagattcaatgacagaagatgctcagaatgcgttacgtcgaacaatggaa
ccttactctaaagttacaagattctttttcatctgtaattatattagtaggatcatagag
ccactggcttcaaggtgtgccaagtttagatttaaaccacttccgaaaggcataatgaaa
agtcgtattttgcatatatgtggagaagaaggcatcaatctggattcgcaggcactttct
actttgagttccatttcacaaggtgatcttcgtcgggccattacattcttgcagggagct
gctcgcttgtatggatcatccatatcctccaaggatttaattagtgtgtccggggtcata
ccggaggaagttgtacaggatttgttggctgcttgcaagagtggtaactttgatttggca
gacaaagcagtgaataatgtcatttcagaaggctatccagtttctcagatgatctctcag
ttatttgatatcatcgtggaagccaatgatttgtcagatgagcacaaggctaggattttc
aaaaagttaggtgatacagataagtgtcttgttgatggagcagacgagtatttgcagctg
ctagatgttggtggtaacatcatgcgcgccttctgtaacatggctcaagatttctccaat
tag
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integrated database retrieval system
