Chenopodium album (lamb's quarters): 145620460
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Entry
145620460 CDS
T11950
Symbol
LOC145620460
Name
(RefSeq) transcription elongation factor SPT4 homolog 2-like
KO
K15171
transcription elongation factor SPT4
Organism
calb Chenopodium album (lamb's quarters)
Pathway
calb03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
calb00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
145620460 (LOC145620460)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
calb03021
]
145620460 (LOC145620460)
03019 Messenger RNA biogenesis [BR:
calb03019
]
145620460 (LOC145620460)
Transcription machinery [BR:
calb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
145620460 (LOC145620460)
RNA polymerase I system
145620460 (LOC145620460)
Messenger RNA biogenesis [BR:
calb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
145620460 (LOC145620460)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt4
PylS_N
Motif
Other DBs
NCBI-GeneID:
145620460
NCBI-ProteinID:
XP_081531267
LinkDB
All DBs
Position
27:complement(138674..146393)
Genome browser
AA seq
117 aa
AA seq
DB search
MGSVVAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFGLDKDHERVVECTTPNFT
GIISVMDPSRSWAARWLRIGRFVPGCYTLAVSEALPEEFQAICEDERVQYVPPKQKS
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcgtggtggcacagatacccaccagctttggacatgagcttagagcttgcctt
cgctgcagacttgtcaaaacctatgatcagtttagggaatcaggatgcgaaaactgtccc
ttctttggcttggataaagatcatgagcgtgttgttgagtgtactactcctaatttcact
gggataatttctgttatggatccaagtcggagctgggctgctcgctggctacgcattgga
agatttgttcctggatgctacacccttgctgtatcagaggcacttcctgaggaattccag
gctatctgtgaggatgaacgtgttcaatatgtgcctccgaagcaaaagtcttag
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