Chenopodium album (lamb's quarters): 145623881
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Entry
145623881 CDS
T11950
Symbol
LOC145623881
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
calb Chenopodium album (lamb's quarters)
Pathway
calb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
calb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
145623881 (LOC145623881)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
calb03019
]
145623881 (LOC145623881)
03009 Ribosome biogenesis [BR:
calb03009
]
145623881 (LOC145623881)
04131 Membrane trafficking [BR:
calb04131
]
145623881 (LOC145623881)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
calb04147
]
145623881 (LOC145623881)
Messenger RNA biogenesis [BR:
calb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
145623881 (LOC145623881)
Ribosome biogenesis [BR:
calb03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
145623881 (LOC145623881)
Membrane trafficking [BR:
calb04131
]
SNARE
SNARE associated proteins
Others
145623881 (LOC145623881)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
145623881 (LOC145623881)
Exosome [BR:
calb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
145623881 (LOC145623881)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_2
AAA_33
AAA_5
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_28
Mg_chelatase
nSTAND3
AAA_17
Parvo_NS1
ATPase_2
AAA_18
nSTAND_NTPase5
ABC_tran
NB-ARC
Viral_helicase1
AAA_7
TsaE
IstB_IS21
DUF815
NACHT
Vps4_C
Zeta_toxin
AAA_lid_PRS2_C
AAA_24
Molydop_binding
Zot
Motif
Other DBs
NCBI-GeneID:
145623881
NCBI-ProteinID:
XP_081532906
LinkDB
All DBs
Position
3:18736805..18744625
Genome browser
AA seq
804 aa
AA seq
DB search
MADPAESSDKGAKRDFSTAILERKKAVNRLVVDEALNDDNSVVSMHPDTMEKLQLFRGDT
VLIKGKKRKDTICIALADETCEEHKIRMNKVVRSNLRVRLADVISVHQCPDVKYGKRVHI
LPIDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDYFLVRGGMRSVEFKVIETDPPEYCVV
APDTEIFCEGEPIKREEEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKP
PKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNA
PSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPAL
RRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLSEDVDLEKISKETHGYVGADLAALCTE
AALQCIREKMDVIDLEDETIDAEILNSMAVTNEHFHTALGQSNPSALRETVVEVPNVSWD
DIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQA
NFISVKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRGSSSGDAGGAA
DRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYSIF
KAALRKSPIAKDVDIRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRKDNP
EAMEEDVDDEVAEIKAAHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFANT
TSGTTGTDAFAASAGGVDEDDLYN
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcctgctgaatcctctgataagggagcgaaaagagattttagtactgcgatt
cttgagcgtaagaaggctgtgaatcgtttggttgtcgatgaagctttgaatgatgataat
tcggttgtttctatgcaccctgataccatggaaaagcttcagctttttcgtggtgatact
gttctaatcaagggaaagaaaaggaaggacacaatctgcattgcccttgctgatgagaca
tgcgaagaacataagataagaatgaacaaggttgtgagatctaatttaagggtgcgactt
gcagatgtgatttctgtacaccaatgtcctgatgtgaaatatgggaagcgtgtgcatatt
cttcctattgatgataccattgagggtgtcactggaaatctatttgatgcatacctaaaa
ccttattttctggaagcttaccggccagtgaggaagggagactattttcttgtgcgagga
ggaatgagaagcgttgaatttaaggttattgagactgatcctcctgaatattgtgttgtt
gccccggatactgagattttttgcgagggtgagccaattaaacgagaagaggaggataga
ttagatgaggttggttatgatgacgtgggtggtgttaggaaacagatggcccaaattagg
gaactggtagagttgccattgagacatccacaattgttcaaatctattggtgtcaagcca
ccaaaaggaattttgctctatggaccaccaggttcgggaaagactttgatagcccgagcc
gtggcaaatgaaactggtgcattcttcttttgtatcaatgggccagagatcatgtcaaaa
ttggctggggaaagtgaaagcaatcttaggaaagcttttgaggaagctgagaagaatgct
ccatccatcattttcattgatgaaattgattctattgctcccaaacgagagaaaacccat
ggagaagttgagaggcgtattgtttcccagcttttgactcttatggatgggcttaaatca
cgggcacacgttattgttatgggtgctacaaatcgtcctaacagcattgacccagcactg
agaaggtttggtcgatttgacagagaaatagatattggtgttccagatgaaattgggaga
cttgaggttcttcgaattcacacgaaaaacatgaagctttctgaagatgttgatttagaa
aaaatttctaaggaaacacatggttatgttggtgctgacctagctgccttgtgcactgaa
gctgcacttcaatgtatcagagaaaagatggatgtaattgacctggaagacgagactatt
gacgctgagatccttaattccatggctgtcacgaatgaacacttccatactgctcttggg
cagagcaatccatctgctctgcgtgaaacggttgtggaagttcctaatgtctcttgggat
gacattggtggccttgaaaatgtcaaaagggaacttcaagagactgttcaatatcctgtg
gagcatcctgagaaattcgagaaatttggaatgtctccttccaagggagttcttttctac
gggcctcctggatgtggaaagactttgctggcaaaggctattgctaatgaatgtcaggct
aacttcatcagtgtgaaagggcctgaattgctaacaatgtggtttggagagagtgaagct
aatgtcagagagatttttgacaaggcccgcggatcagctccatgtgttctattctttgat
gagcttgactcaattgcaactcagaggggaagcagttcaggtgatgcaggtggtgccgct
gacagggttttgaatcaacttttgactgaaatggatggcatgtctgccaaaaaaactgtt
ttcatcattggagccaccaatagacctgatattattgatccagcgcttctgagacctggt
cgtcttgatcaactaatatatattcctcttccagatgaggaatctcgttattcgattttt
aaggctgcattgaggaagtcgcctattgctaaagatgttgatattagagcgcttgccaag
tacactcagggcttcagtggggcagatataactgaaatatgtcagcgagcttgcaaatat
gccatcagagagaacattgagaaggacattgaaagagagagaaggagaaaagataaccct
gaggctatggaggaggatgtggatgatgaagttgctgaaatcaaggctgcgcattttgag
gaatccatgaaatttgcccggagaagtgtcagcgatgctgatatccgtaagtatcaggca
tttgctcagaccttacagcaatctagaggttttggtacagagttccgtttcgccaatacc
acttctgggactactggtacagatgcatttgctgcttctgctggtggagttgatgaagat
gatctctacaattag
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