Chenopodium album (lamb's quarters): 145624236
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Entry
145624236 CDS
T11950
Symbol
LOC145624236
Name
(RefSeq) E3 ubiquitin-protein ligase CHIP-like
KO
K09561
STIP1 homology and U-box containing protein 1 [EC:
2.3.2.27
]
Organism
calb
Chenopodium album (lamb's quarters)
Pathway
calb04120
Ubiquitin mediated proteolysis
calb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
calb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
145624236 (LOC145624236)
04120 Ubiquitin mediated proteolysis
145624236 (LOC145624236)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
calb03110
]
145624236 (LOC145624236)
04131 Membrane trafficking [BR:
calb04131
]
145624236 (LOC145624236)
04121 Ubiquitin system [BR:
calb04121
]
145624236 (LOC145624236)
Enzymes [BR:
calb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
145624236 (LOC145624236)
Chaperones and folding catalysts [BR:
calb03110
]
Other chaperones and cochaperones
Others
145624236 (LOC145624236)
Membrane trafficking [BR:
calb04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
145624236 (LOC145624236)
Ubiquitin system [BR:
calb04121
]
Ubiquitin ligases (E3)
U-box type E3
145624236 (LOC145624236)
Multi subunit type E3
STUB1-CHIC2 complex
145624236 (LOC145624236)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
U-box
TPR_2
TPR_1
TPR_11
TPR_8
TPR_BSK1_C
ANAPC3
TPR_17
TPR_14
TPR_16
CFAP70_TPR_C
zf-NOSIP
ARM_TT21_C
CFAP70_mid_TPR
TPR_9
TPR_19
At5g52880_ARM
zf-Nse
Motif
Other DBs
NCBI-GeneID:
145624236
NCBI-ProteinID:
XP_081533367
LinkDB
All DBs
Position
3:complement(75604518..75612944)
Genome browser
AA seq
281 aa
AA seq
DB search
MSPMAAISSVAKQAEQLRQDGNNCFKKSRFGAAIDAYTEAITLCPNIPVYWTNRALCHMK
KNNWDRVMEDCRRAVQLDNSSVKAHYMLGLALIRKQDYSDGVKELEKALDLGRGANPKGY
MVEEIWQELAKARYLLWEQESSQRSWELQTLKEACQEALKEQHIMDSSKTEGFINEADAG
LMKQLDALDNVFRKAGEHDIPSEVPDYLCCRITLDIFRDPVITPSGVTYERAIILEHLEK
MGKFDPITREPLDQSQLISNLAIKEAVQAYLEDHGWAYKTD
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgtctccaatggcggccatctcttcagtggcgaaacaagcggagcaacttcgacaagac
ggaaataactgcttcaagaaatcaaggtttggagctgccattgatgcttatactgaggca
attacgttgtgccctaatattccggtttattggacgaatcgtgctctttgtcatatgaag
aagaataattgggatagagttatggaagattgtcgaagagcagtacaacttgacaatagt
tcggtcaaggcacattatatgttgggtcttgcattgatacggaaacaagactatagtgac
ggagttaaagaactggaaaaggcattagatctaggaagaggtgcaaatccaaaaggttat
atggtagaggagatctggcaagagcttgccaaagcaagatatctattgtgggaacaggaa
tctagccagcgttcgtgggaattgcagaccttaaaagaagcatgtcaagaggctcttaag
gagcagcatataatggattcttccaagactgaaggatttattaatgaagcagatgctggc
cttatgaagcagttagatgcattggataatgtttttaggaaagctggagaacatgacata
ccttctgaggtgcctgactatttatgctgcagaatcacacttgacatattccgcgatcct
gtcattacaccaagtggggtcacatatgagagagccattatccttgagcatcttgagaag
atgggtaagtttgacccaatcactcgtgaaccacttgatcaatcccaattgatttcaaat
ttggccataaaagaagcagttcaggcatatctggaggatcacgggtgggcttataagaca
gactag
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