Chenopodium album (lamb's quarters): 145624451
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Entry
145624451 CDS
T11950
Symbol
LOC145624451
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
calb
Chenopodium album (lamb's quarters)
Pathway
calb03030
DNA replication
calb03410
Base excision repair
calb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
calb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
145624451 (LOC145624451)
03410 Base excision repair
145624451 (LOC145624451)
03420 Nucleotide excision repair
145624451 (LOC145624451)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
calb03032
]
145624451 (LOC145624451)
03400 DNA repair and recombination proteins [BR:
calb03400
]
145624451 (LOC145624451)
Enzymes [BR:
calb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
145624451 (LOC145624451)
DNA replication proteins [BR:
calb03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
145624451 (LOC145624451)
DNA repair and recombination proteins [BR:
calb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
145624451 (LOC145624451)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
DNA_pol_B
zf-DPOE
DNA_pol_B_exo2
RNase_H_2
Motif
Other DBs
NCBI-GeneID:
145624451
NCBI-ProteinID:
XP_081533608
LinkDB
All DBs
Position
3:80909385..80931346
Genome browser
AA seq
2217 aa
AA seq
DB search
MSGDFRRRDRKDDRNWKKKQQQLVRSAEDELESKLGFDVFTEGDKRLGWLLTLSSSSLQD
KDSGNLYSCVDLYFVTQDGSSFKVKYKFRPYFYAATKDKMETDVDAYLRRRYENDIANIE
IVEKEDLDLKNHLSGLRKSYLKISFDTVQQLMSVRNDLLRVVDRNQTKFEAAQAYESIIT
GKGQQRPHDFVDCITDLREYDVPYHVRFCIDNDVRCGQWYDVSISSTGVVLDKRIDLLQR
AEVHVCAFDIETTKLPLKFPDAEYDLIMMISYMVDGQGYLIINRECVGDDIEDLEYTPKP
EFEGYFRVTNVKNEVELLRHWFSHMLDVKPGIYVTYNGDFFDWPFLERRAAHHGLKMSDE
IGFQCDKVQGECRARFSCHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV
RFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMPPDEVLRKGSGTLCEMLL
MVQAFSANVICPNKHQSEPEKFYNNKLLESETYIGGHVECLESGVFRSDLPTSFKVDPSA
YQQLIDNLDRDLQYAIKVEGKMDLDSVANYDEVKGAIKEKLSCLRDEPVREESPLIYHLD
VAAMYPNIILTNRLQPPSIVTDEDCTACDFNRPGKTCLRTLEWVWRGETYTAKKSDYNHI
KRQIESELVDGNNGQFSKSFLDLPKADQQSKLKERLKKYCQKAYKRVLDKPSTELREAGI
CMRENPFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNPIKIQEAQDMVIVYDSLQL
AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGRPLELDTDGIWC
ALPGSFPENFTFKTKDSKRKLTISYPCVMLNVDVARNNTNDQYQTLKDSVNRTYATHSEC
SIEFEVDGPYKAMIIPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQA
EMFDKFLDGSTLEECYAAVAAVADRWLDLLDNQGNDIADSELLHYISESSTMSKSLADYG
EQKSCAVTTAKRLADFLGDTMVKDKGLLCQYIVASEPKGTPVSERAIPVAIFETETELMK
FYVRKWCKTSSDVGIRSIIDWSYYKQRLSSAIQKIITIPAAMQKVANPVPRVVHPDWLHK
KVREKEDKFRQKKIKDLFSSKRDSMEKTDAASNYADNGIDKHKVPDLEDFGNSSGTGVGS
RPVVHSYEVNGQHSLHTTALDHQSEHECTYSQDNSFIEVDKSEDYAGWLEQKKRKWKENR
EKRKRQRLSNAKTPKQGTGVSELHESLTNQKRNLGKTGVTSYFRRQELSLTSSYWQVLQL
VPSDCPGQFFAWVIVEGSMLKVPVTVPRVFYLNSKAPITEEFPGKRVNKILPHGHRSHNL
IEIIIDEKEFREESKRLMAHLADPEVEGIYETKVPPELNAVLQIGCVCKVDRAAKKRNLQ
AIWSLNELQMKTTAECRYLDNSLSFFYLYHSCCEGRAVYGGYFPAANMISFVVVDPHQNR
SLNPTNIKRFYHEVCQALSVESSISQGVMSYKVDYVVQNDEAERIMQKLISGHRPHNHRP
CLAIIECPNVHLLKSGIQVLNDLPCVSIPANARDSHYPALGWQTVAAKIALQRCAASSQW
LNERISLSRYAHVPLGNLELDWIIYTIDVFFSRALRDHQQVLWISDDGLPELGGFSDEDG
CFVDEVNQPVLVYPGAYRKVSVELKIHHLAVNALLKSSQINEIEGSGLHGFEQDTDPDTC
TSSEQYDFDESTFCGPAFRVLKQLVQRCLQDAVTSGNVYADAILQHLYRWLCSPRSKLHD
PALYRMLCKVMQKVFALLLAEFRKLGATVIFANYSKVILDTGKADLAAARAYCDSLLKAL
QTRDLFEWVEIEPLHFWHSLLFMDQYNYGGIQAKDQDESSASISASSSRCLPGDLQVDIV
SSWNIAEHLPKSTQDHFVVMISEFMYKPWEYALNHAANETFLGDGDLCTPSITAPIAEKF
ESHMTEYLKDQISSYFSDKLFMVVREITHHSKGMKRPQNDDDLLQVDPQLTGQAHTEGVA
LEFIKHICAVLVLDQNVQHDVLVMRRNLLRLIHVREFAPEAEFSPPLPSFVLPNIVCSYC
NDVRDLDLGRDPSLLTQEWRCSMPQCGQPYDREKMENSLLQIVRQRERLYHLQDLVCVKC
HMVKDSHLTEQCKCAGAFKCLEDASEFHRKMQVFYKIAVQQNYQLLRECISWILEIR
NT seq
6654 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgatttccgacgtcgtgatcggaaagatgaccggaattggaagaagaagcag
cagcaattggttcgaagtgctgaagacgagcttgaatctaagctagggtttgatgtattt
actgaaggtgataagcgtcttggttggctacttacgttatcatcttcgtcacttcaagat
aaggatagcgggaatttgtacagttgcgtagatttgtattttgttactcaggatgggtct
agcttcaaggtgaagtataaatttcggccttatttttacgcggccacaaaagataaaatg
gagactgatgtagatgcatatcttagacggcggtatgaaaatgacatagccaatatagag
attgtggagaaggaagaccttgatcttaaaaaccacttatctgggttacggaagtcatac
ttaaagatatcatttgacacagtccaacagttaatgagtgtgaggaatgacctgttacgg
gttgttgatagaaatcaaacaaagtttgaagccgctcaagcttacgagtctattatcact
ggaaaaggccagcaaaggcctcacgattttgttgattgcataactgatctccgcgaatat
gatgttccttatcacgtccgattttgcattgacaatgatgtgaggtgtggacaatggtac
gatgtcagtatatcgagcacaggtgttgtgcttgataagaggatagacctgctgcaacgt
gctgaagttcatgtttgtgcatttgatatagagactacaaagcttcctttgaaattccca
gatgctgagtatgatttgataatgatgatctcatacatggttgatggacaaggatatttg
attataaaccgagagtgtgttggggacgatatagaggacttggagtacactccaaaacca
gaatttgaaggatatttcagagtcaccaatgtgaaaaatgaggtggagcttttaagacac
tggttttctcatatgctagatgtaaagcctggtatatatgttacatacaacggggatttc
tttgactggccatttttggaacgcagagcagcccaccatggcttaaaaatgagtgatgag
attggttttcagtgtgacaaggttcagggtgaatgtcgtgctagattttcttgccacctc
gattgctttgcatgggttaagcgagacagttatcttcctcaagggagtcagggcttgaag
gctgttaccaaagcaaaattaggttatgacccattggaggtgaatcctgaagacatggtt
cgttttgccaaagaaaagcctcagatgatggcatcttattctgtttctgatgctgttgca
acttattacttgtatatgacatatgttcatcctttcatattttcccttgctactattata
cccatgcctccagacgaggttttgcggaaaggaagtggaactctttgtgagatgctattg
atggtccaggcattcagtgcaaatgttatctgtcctaacaaacaccagtctgagccagaa
aaattctacaacaataaactcttggagagtgagacttacattggtggtcatgtggagtgc
ctcgagagtggtgtttttagatccgatcttccaactagtttcaaagtcgacccatctgcg
tatcagcaactaattgacaaccttgatcgtgatctgcaatatgctattaaagtggagggg
aagatggacttggattctgttgcaaattacgatgaagtgaagggtgcaattaaggaaaag
ctttcttgcttacgagatgaacctgtacgcgaagaatcccccttgatatatcatttggat
gttgctgctatgtaccctaatattattctgacaaacaggcttcagcccccatctatagtt
acagatgaagactgcactgcttgtgatttcaatcgccctggaaaaacttgtctacgaact
cttgaatgggtctggcgtggagaaacttacacggcaaagaaaagtgattataaccatata
aagagacaaattgaatctgaattggtggatggcaataatgggcaattttctaagtctttc
cttgacctcccaaaggcagatcaacagtctaagctaaaggaacgtcttaaaaaatactgt
cagaaggcatataagcgggttcttgacaagccttctactgagcttcgagaagctgggatc
tgtatgagggaaaatccattttatgttgacactgtgcgcagcttccgagatagaagatac
gagtataaaggactcaataaagtttggaagggaaagctgtctgaagctaaagctagtgga
aatcctattaagatccaggaagcacaggatatggttatcgtgtatgattccttgcagctt
gctcataagtgtatcctaaattccttctacggatatgtcatgcgcaagggtgctagatgg
tattccatggaaatggctggggtagtcacctatacaggggccaaaatcattcagaatgct
cgattattggttgaaaaaattggtagaccgcttgagctagacacagatggaatctggtgt
gcattaccggggtcatttcctgagaacttcacattcaaaacaaaagactcaaagaggaag
ctgacaatctcttatccttgtgttatgctcaatgtagatgtagcaagaaataacacaaat
gatcaataccagacactaaaggattctgtcaatagaacatatgcaacacatagtgagtgc
tcaattgagtttgaagtggatggcccttacaaggcaatgataattccggcctccaaggaa
gaagggatcctgataaaaaagcggtatgcagtttttaatgacgatggaacccttgcagag
cttaaaggttttgaaatcaagcgcagaggtgagcttaagctcatcaaagttttccaggct
gagatgtttgacaaatttcttgatgggtcaactttagaagagtgttatgcagcagttgcc
gcagttgctgatcgctggcttgatcttcttgataaccaagggaacgatattgcagacagt
gagctgctacattacatttccgaatcaagcacaatgagtaagtctttggctgactatgga
gaacagaaatcctgtgcagtgaccactgccaagcgtcttgctgattttcttggagatacc
atggtcaaagataaagggcttctctgccagtacatagttgcatctgagccaaagggaaca
ccagtaagtgagagagcaattcctgttgcaatatttgaaactgaaacggaacttatgaaa
ttctatgtgcggaaatggtgtaaaacttcatcggatgttggcattagatccatcattgac
tggtcttattacaagcagcgtctgagttcagccattcagaaaatcataaccattccagct
gcaatgcaaaaggttgccaaccctgtacctagggtagttcatcctgactggctgcacaag
aaagttcgggaaaaggaagacaaattccgccaaaagaagataaaggatttattctcttct
aagcgggattctatggaaaaaactgatgcagcttccaactatgcagataatggaatagat
aaacataaagttccagatttggaggactttggaaactcaagtggaactggggttggcagt
agacctgttgtgcatagctatgaagtaaatggacagcattcattgcatacgacagcctta
gatcaccaaagtgaacatgaatgcacatattctcaggacaacagttttatcgaagtagat
aagagtgaagactatgcaggatggcttgagcagaagaagcgaaagtggaaagagaaccga
gaaaaacgaaagagacagaggttatctaatgcaaagaccccaaaacaaggtactggtgtt
tctgagttacatgagagtttgactaatcagaaaagaaacctgggaaaaaccggagttact
tcatacttcagaaggcaggaattgtctctcactagcagctactggcaggttctgcagctt
gtcccaagtgattgccctggtcaattttttgcttgggtcattgtggaaggcagcatgctt
aaggttccagttactgttcctagagtgttttatctcaactccaaagctccaataactgaa
gaatttcctggaaaacgtgttaacaagattcttcctcatggacaccgcagccacaacctg
attgagataataattgacgagaaagaattcagagaagagagcaagagacttatggctcat
cttgcagatccagaagtggagggtatttatgaaaccaaggtgccaccagaactaaatgct
gtcctccagattggatgtgtctgcaaagttgatagagcagctaagaaacgaaatcttcaa
gctatctggagcctaaatgaactgcagatgaagaccacagcagaatgtcgatatctggat
aattctctctccttcttttacttgtatcacagttgctgtgaagggcgagcggtgtatggc
ggatatttccctgcagctaacatgatttcctttgttgtggtggatccccaccagaacaga
agtttgaatcccactaatattaagagattttatcatgaagtttgtcaagctttatccgtt
gaatcttcaatttctcagggtgtcatgtcatacaaggtggactatgttgttcaaaatgat
gaagctgaaaggatcatgcagaaattaataagtggacacaggccgcacaatcacagacct
tgccttgctattattgaatgtccaaatgttcatcttttgaagtcaggtatacaagtatta
aatgatcttccatgtgtgagcatccctgccaatgctcgtgatagtcactatccggctctt
ggttggcaaactgtagctgcaaaaattgctctgcagagatgtgcagcatcatctcaatgg
ctaaatgagaggatatctctctcaagatatgcacatgtacccctggggaatcttgaactt
gactggattatatacactatagatgtattcttctcaagagcattacgtgaccaccaacag
gtactttggatttctgatgatggacttccagaacttggtggctttagtgacgaggacgga
tgctttgttgatgaggtcaatcaacccgttcttgtttatcctggagcatatagaaaggtt
tctgtggagctaaagatccatcacttggctgtgaatgcccttctgaagagcagccaaatt
aatgaaatagagggcagtggcttacatggtttcgagcaagatacagatcctgatacctgt
acatcaagtgagcaatatgactttgacgagtcaactttctgtggacctgccttccgggtt
ttgaaacaacttgtacaaagatgcctacaagatgcagttacgtcaggaaatgtttatgct
gatgcaatattacaacatctttatcgctggctttgtagcccgcggtcgaaacttcacgat
ccagctctatatagaatgctttgcaaggttatgcaaaaggtgtttgcattgcttttagca
gagtttcgcaaattgggtgctacagtcatttttgcaaattattccaaggttatattagac
accggaaaagctgacttagctgcagccagggcttattgtgatagtttgctaaaagcactc
cagacaagggacttgtttgagtgggttgagattgaaccattgcacttctggcattccttg
cttttcatggatcagtacaattatggaggaatacaggccaaagatcaggatgaatcttct
gccagcatttctgcatcctctagcagatgcttacctggtgatcttcaagtagacattgtg
tccagttggaatattgctgaacacttgcctaaaagtactcaagaccattttgttgtgatg
atctccgagtttatgtataaaccatgggagtatgctctaaatcatgcagcaaatgaaaca
tttcttggggatggtgacttgtgtacaccatcgatcacagctccaattgctgagaagttt
gagtcacatatgactgaatatctaaaagatcagatcagctcttatttctcagataaacta
tttatggttgtccgtgagataactcatcactcaaaaggaatgaagaggcctcagaatgat
gatgatttgttgcaagtggaccctcagctaactgggcaggctcatacagagggtgttgct
ttggaatttatcaaacacatttgtgctgttttggttttggaccaaaatgttcagcatgat
gtactggtcatgagaaggaatttgcttagattaatacatgtgagagagtttgctccagaa
gcagaattttctcctcctctaccatcttttgtattaccaaacatcgtttgcagctattgc
aatgatgtccgagatcttgacctgggaagggatccatcactactcacgcaggagtggcga
tgttcaatgccacaatgcgggcagccttatgacagagaaaagatggaaaattctcttctt
caaatagtgaggcagcgggaacgcctttaccacctgcaggacttggtatgtgtcaagtgt
catatggtgaaagatagtcacttgactgagcaatgtaaatgtgctggtgcttttaagtgc
ctggaagacgcgtcagaatttcatagaaaaatgcaagttttctataaaatagctgtgcaa
caaaattatcaacttttaagagaatgtatctcttggattttagaaattagatga
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integrated database retrieval system
