Chenopodium album (lamb's quarters): 145636599
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Entry
145636599 CDS
T11950
Symbol
LOC145636599
Name
(RefSeq) sm-like protein LSM8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
calb Chenopodium album (lamb's quarters)
Pathway
calb03018
RNA degradation
calb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
calb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
145636599 (LOC145636599)
09123 Folding, sorting and degradation
03018 RNA degradation
145636599 (LOC145636599)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
calb03019
]
145636599 (LOC145636599)
03041 Spliceosome [BR:
calb03041
]
145636599 (LOC145636599)
Messenger RNA biogenesis [BR:
calb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
145636599 (LOC145636599)
mRNA degradation factors
5'-3' decay
Lsm complex
145636599 (LOC145636599)
Spliceosome [BR:
calb03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
145636599 (LOC145636599)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
145636599
NCBI-ProteinID:
XP_081544316
LinkDB
All DBs
Position
1:4528640..4532169
Genome browser
AA seq
98 aa
AA seq
DB search
MSAGPGLEPLVDQMISVITNDGRNIVGILKGFDQATNIILDESHERVFSTKEGVQQIVLG
LYIIRGDNISIIGELDEDLDAHIELSQVRGHPLKPVIH
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctggacctggacttgagcctcttgtagatcagatgatctcagttattaccaat
gatggacgcaacatagtgggaatcttaaaaggttttgaccaggcaacaaatattattctt
gatgaatcacatgagagggttttttctaccaaggaaggagtccaacaaattgtattgggt
ttgtacatcatcaggggtgacaacataagcattattggtgagctagatgaagacttagat
gctcatattgagctatcgcaagtgaggggccatcctctgaagcctgtcattcactga
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