Chenopodium album (lamb's quarters): 145638253
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Entry
145638253 CDS
T11950
Symbol
LOC145638253
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B-like
KO
K11267
sister chromatid cohesion protein PDS5
Organism
calb Chenopodium album (lamb's quarters)
Brite
KEGG Orthology (KO) [BR:
calb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
calb03036
]
145638253 (LOC145638253)
03400 DNA repair and recombination proteins [BR:
calb03400
]
145638253 (LOC145638253)
Chromosome and associated proteins [BR:
calb03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
145638253 (LOC145638253)
DNA repair and recombination proteins [BR:
calb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
145638253 (LOC145638253)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
HEAT_GCN1_C
Cnd1
TPR_DNAAF5
HEAT_DAAF5
DExH18_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
145638253
NCBI-ProteinID:
XP_081545344
LinkDB
All DBs
Position
7:complement(69586132..69606595)
Genome browser
AA seq
1373 aa
AA seq
DB search
MAENPEKVISDIGKKLAQQTRLSKDFLIKSLRQAANALLDLDQVPSLKPFIRPFSQSLVK
HGLVHHKDKDVRLLVAVCFCEIIRVLAPDPSFDDKVFKDIFELFVSMFMDLADTTSPYFS
RRVKILETIATLECCRRMLDLDCADLIYKMFKTFFSVVREEHPQSLISGMLSIMALILNE
EEAPQPLLELILRNLRNKGEGPAPASYRLAVALIQNCAEAIKPAVCGLLMSCISDRESVT
SDLKEYYHEMIYEIFQCTPHMLLAVIPNLAQELVTDQVDVRIKSVNLIGKLLALVEDHGI
QEHHYLFVELLKRFSDKSAEVRISALRAVKTCYLANPSAIESDKILSSLEGRLLDFDASV
RTEAIAIVCDLAKFSLKNFPEALIARATDRLRDKMTSVRKEALKKLLEVYREYCTKCHEG
QIELNESYERIPCKVLVLSFDKNLKEFRPQNLELLLAVDFFPASLPVDDKLKHWIYLYSI
FTSAHVNALNLILCQKRRFQTEMQSYLSLRLNAEGNDTKEVDARIKSSFTRMSAACLNSV
KAEESFSKLNLLKDDNLFFQLSRLLEEPEFSSAEALRENFLKSIGDKHPLFEFLELLSLK
CSNNIFCAEHVRYILDHVSGNRCRDKHQKESAFNLLSDIVRNFPKLMRGSEEQFKMLILE
EDSSWCARLLQMLAKAGPFITMELSEIYPLLERLCLEGTRAQSKAAISVIAALLDPSEQY
LWAELFQKLVKSLYSDCNLPTVLQSLGCLSQHAVVVFQKQENEILSYIQKRIFENKIYGD
AVVVDEKSGSNVSFHCMLKIYGLKTLVKSVLPKKQNYGKVQISNLLDILSKVLLTDDFAD
AATVCDNDMAHIRLAAAKAVLRLSRRWEIHISPQLFQSTILMAKDTSFAREAFLDKTHKL
LKGRVASSKFACAFPLAASDCVKDLQDKSLNYLIEFIKENSKAARICSTLGKEGSMTDSP
AYTVVFLLHVLAHDAGWPPVNSHNEEHTAQFCRPLLLLLHLLVNSQFVDGDLDLAKKNSL
YLRSIFRAIRRAEDVVDPEKTPKLHMLAEIGLSVLNSLKHTFINLSRAPGLVLLPSSLYR
TNQDNCFSVEFQVNENFLKKLVQVFECDFTQLSSSTVKRSRKYLKDGLQGQNALELPMSK
QVELSKNRTADKKVAEIEMASNCVLEACPKGRQESAVDNSSVGELQLQVGSSVIEEVEAN
ISADIVHVPAKEHQIDSESATLELFEIESDISTQEVDVSLKNSPQNERKRKKFCDFTENL
GHYETNVRQSCSSGGSTVSLLRQRGPKKQCSNDIGSRITTVSRAGGAKSQGSGTSQRNIL
LDRTNSLSVNGLPKHSQPKKSCLGLKISTDTSESDVSHENQDAIAFRTRRRKV
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaatccagaaaaagtaatttccgatatcggcaaaaaacttgctcaacaaact
cgtctttctaaagattttctcattaaatcacttcggcaagctgcgaatgctttgctggac
cttgatcaggttccctcgcttaaacctttcataaggccattcagtcagtctcttgtaaag
catggactggttcatcataaagacaaagatgtccggttactagttgctgtttgtttctgt
gaaattattcgggtccttgcgcctgacccttcatttgatgataaagtctttaaggatatt
tttgagctttttgttagtatgtttatggatcttgctgataccacaagcccttatttttca
agaagagttaaaatattagagaccattgcaactctggaatgctgtcgtcggatgctagat
ctggactgtgctgatttaatctataaaatgttcaaaacattcttctctgtcgtaagggag
gagcacccgcagagcttgattagtggtatgctgtccatcatggcactaatattgaatgaa
gaagaggctcctcagccacttctggagctgattctaaggaatctaagaaacaagggagag
ggtcctgctcctgcttcttatcgtcttgccgttgctcttattcaaaattgtgcagaagct
atcaagcctgctgtctgtggacttttaatgtcttgcatttcagatagagagagtgtgaca
agtgatctaaaagaatattatcatgaaatgatatatgaaatctttcagtgcactccacat
atgcttcttgcagtcatcccaaatttagctcaagaattagtgactgatcaagtggatgtc
aggataaaatctgttaacttaattggaaaacttctcgcactggttgaagatcatggtata
caagaacaccattacctatttgttgaacttctgaaaagattttctgacaaatcagctgaa
gtcagaatcagtgctctacgcgctgttaaaacttgctacttggctaacccatctgcaatc
gaatcagacaaaattctttcttcccttgaaggccgtctgctagattttgatgccagtgta
aggacagaggcaatagcgattgtttgtgatttggccaagtttagcttgaaaaacttcccg
gaagctctaatagctcgtgctactgaccgacttcgtgacaagatgacctcagttaggaag
gaggccctgaagaagttgctagaagtttatcgtgagtattgcaccaagtgtcatgaaggg
cagatagaacttaatgaatcttatgagcgaattccctgcaaagtactggtgctttctttt
gataaaaatttgaaggagttcaggccccaaaacttggagcttcttctggcagtggatttc
tttccagcatctcttccagtggatgataaattgaaacattggatctacctgtactcaatt
ttcacctctgctcatgttaatgcactaaatctgatattatgtcaaaaaagaaggtttcaa
acagagatgcaaagctatttatcccttcggttaaatgcagagggaaatgatacaaaagag
gtggatgcgagaataaaaagttctttcacacgaatgtcagcagcatgccttaattctgtc
aaagcagaagaatcattttctaagctgaacctactgaaggatgataaccttttttttcaa
ttgtcccgattgttggaagaaccagaattttcaagtgcagaggctttgagggagaatttt
ttgaaaagcattggggataagcatcctctttttgaatttttggaactgctctctttgaaa
tgttcaaacaatatattttgtgctgagcatgttcgatatattttggatcatgtttctggc
aacagatgcagagataaacatcagaaggaatctgcttttaacctcctgtctgatattgtc
agaaacttcccgaaacttatgagaggttcagaagaacaatttaaaatgctgatactagag
gaggattcctcatggtgtgcgaggttacttcagatgttagcaaaagctggtccatttata
accatggaactcagtgaaatctacccgctgctggagaggttatgccttgaggggactcgt
gctcagtccaaggctgctatatcagtcattgctgcattacttgatccttctgaacaatat
ctttgggcggagctgttccagaaacttgtgaagtcactttatagtgactgtaaccttccc
actgtattgcagtctctgggatgtctatcacaacatgctgttgtggtatttcagaaacag
gaaaatgaaatactatcatacatacagaaaagaatttttgagaacaaaatatatggagat
gctgttgtggtagatgagaaatctggaagcaatgtctccttccattgcatgttgaaaatt
tatgggctaaaaaccctagtcaagagtgtcttaccaaagaaacaaaattatgggaaagta
caaataagtaacttgttggatatattgtccaaagtgctactaacagatgattttgctgat
gctgcaacagtatgtgataatgacatggctcacattagattagcagctgctaaggctgtt
ctgcggctttcaagacggtgggagatacatatttcaccccaattatttcagtcaactatt
ctgatggcaaaggacacttcttttgcacgtgaagcatttcttgataaaactcacaagtta
ctgaaaggacgtgttgcctcaagtaaatttgcttgtgcatttcctttggctgcatctgat
tgtgtcaaagatctgcaagataagtcattaaattatttgatagagttcatcaaggaaaac
agcaaagctgctcgcatttgttctactttgggaaaagaaggatcaatgaccgatagccca
gcttacacagtggtgttcttgctccatgttcttgctcatgatgcaggatggccacctgta
aactctcataatgaagagcatactgctcagttttgcaggccacttcttctccttttgcat
ctgttggttaactctcaatttgttgacggggacttggatcttgccaaaaaaaactctctg
tatttgcgaagtatttttcgggccatcagaagagccgaggatgttgtagatcctgagaaa
acacctaagctgcatatgttagcagagattggactgtcagttttaaattctctaaaacat
actttcattaatttgtcccgtgcccctggactagttcttcttccatcatcgctgtataga
actaatcaggataattgcttttcagtagaattccaggtcaatgaaaattttctgaaaaag
cttgttcaagtctttgaatgtgattttactcagttgtctagctcaactgttaagcgtagt
cgcaaatacctgaaagacggtttgcaaggtcagaatgcccttgagttacccatgtctaag
caagttgaactgtcaaaaaataggacagcagacaaaaaggttgccgagatagagatggcc
tcaaattgtgtccttgaagcatgccccaagggaagacaagaaagtgcagtagataactct
tccgttggagaactacaattgcaagttggttcatcagttattgaagaggttgaggcaaat
atttctgcagatattgtacatgtacctgcaaaagagcatcaaatcgattctgagtctgca
actttggaactctttgaaattgaatcagatatttctactcaagaggttgatgtctcgttg
aaaaattcacctcagaatgagaggaaaaggaaaaaattctgtgattttacagaaaatctg
ggtcactatgaaacaaatgtcagacaaagttgcagctcaggcgggtcaactgtttccctt
ctccggcagcgcggtcccaaaaaacagtgttctaatgacattggaagtagaattaccact
gtttcaagagcaggcggtgctaaatcacaaggatcaggaacaagtcagcggaatattctg
ttagatagaacaaactcattgtcagtgaatggcttgccgaaacattctcagcctaagaag
agttgtctgggactcaaaatatctacagacacatcagagtccgatgtttctcatgagaac
caggatgcgattgccttcagaactcggagacggaaagtttaa
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