Chenopodium album (lamb's quarters): 145639288
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Entry
145639288 CDS
T11950
Symbol
LOC145639288
Name
(RefSeq) protein ALTERED SEED GERMINATION 2-like isoform X1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
calb
Chenopodium album (lamb's quarters)
Brite
KEGG Orthology (KO) [BR:
calb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
calb04121
]
145639288 (LOC145639288)
Ubiquitin system [BR:
calb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
145639288 (LOC145639288)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_C
NBCH_WD40
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
TRM82_WD
ANAPC3
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_VPS8
TPR_2
Rapsyn_N
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
145639288
NCBI-ProteinID:
XP_081546613
LinkDB
All DBs
Position
7:complement(68609522..68625811)
Genome browser
AA seq
757 aa
AA seq
DB search
MDSFPFHDGNISSFIDTRNIDFRHDVKHTLQMHSSMVRRLSLEREMEGHTGCVNTIAWNS
TGSLLISGSDDTQINIWRYSDRKLLNCIDTGHSTNIFCTKFIPETSDEKVASGAGDAEVR
VFNLSYLSGGRVEETAMTPYAHFQCHTKRVKKLAVEVGNPNVIWSASEDGTLRQHDLREG
CSCPPAGSSNQECRSVLLDLRGAAKRSLAEPPKHPLQLKSCDISVTRPHLLLVGGSDAFA
RLYDRRMLPPMSSCRRKNSPPPCVNYFCPIHLSERGRSSLHLTHVTFSPNGEEVLTSYSG
EHVYLMDLKQGGENSMQYTCGDVAKHWSFSPVLDGVEFSPVEAVASKNISSAKSYDTVQI
GKCKKLMEIAKTCLEEGAKYYYGIEACNEVLDGGYKIDRQLRHDCLCTRAALFLQRKWKN
DAHMAVRDLNQAQKINSSSFKARFCMSEALSQLGKHKEALDFALAAQSLDPSRAEALDRV
ESIRKELSAAEAEKNKKLNDVGSKTEPRAGRVISLSDILYRSEANSDASQDGPRSDREDS
DYDEELELDFETSMSGDEGRDAEPVHGSLNLRIHRKAGSSNGSCGSPSSSQNDRTSYQPE
AVIDMKQRYVGHCNVGTDIKQASFLGQNGDYIASGSDDGKWYIWEKKTGRLVKMLVGDEA
VVNCVQCHPFDSVVATSGIDNTIKIWTPSAPTPSVAGGSADLDTEGSDAANVSEAMEGNQ
RRLCQTREAILPLELLERFRMHDFAEGTLHPFECAQS
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggattccttcccctttcacgacggcaacatttccagtttcattgacacccgtaacatc
gacttccgccatgatgtcaagcatactttacaaatgcactcgtccatggtgcgaaggctg
tcattggaaagggaaatggagggacacacaggttgtgtaaatactattgcatggaactca
actggttcactcttgatatctggatcagatgacacccagattaatatatggagatactct
gatcgtaagcttttgaactgcattgatacgggtcattctaccaacatattctgtacaaaa
tttatacctgagacttctgatgagaaagtggcgtctggggctggtgatgcagaggtccgt
gtgttcaatctctcttatttaagtggaggaagggttgaagagacagctatgactccttat
gctcattttcagtgtcatactaagagagtcaaaaaattagcggttgaggttggaaaccca
aatgtgatctggagtgccagtgaagatggaaccttgaggcagcatgaccttcgtgagggt
tgttcatgtcctcccgctggatcttccaatcaagaatgccgcagtgtactacttgacttg
cgaggtgctgcaaaaaggtccttggctgaacctcctaaacacccacttcaattaaagtct
tgtgatatcagtgtgacaaggccacatctgcttcttgtcggaggaagtgatgcatttgct
cgtttgtatgatagaaggatgctgcctccaatgtcttcctgccggagaaaaaattcacca
cctccttgtgttaactatttttgcccaattcatctctctgagaggggacgatcaagcttg
catttaactcatgttacatttagtcccaatggcgaagaagttcttacaagttatagtgga
gagcatgtctacttgatggacctgaagcaaggcggtgaaaattctatgcagtacacatgt
ggagatgttgcaaagcattggagcttttctcctgttcttgatggagtagaattttcacct
gtagaagctgttgcttctaaaaatatttcctcggcaaaaagctatgataccgtgcagatt
ggcaagtgcaaaaaactgatggaaattgcaaaaacatgtttggaagagggagcaaagtat
tattatggaattgaagcatgtaatgaagttctggatggaggttataaaattgatcgccag
cttaggcatgattgtctctgtacacgtgctgccttgtttcttcagcggaagtggaaaaat
gacgcccacatggctgttagggatttgaatcaagctcagaaaattaattcatcttcattt
aaagcacgtttctgcatgtctgaagctctatctcagttgggaaagcataaagaagctcta
gattttgctcttgcagctcagtctctggatccctcaagagccgaagcgttggatagggta
gaaagtatacgaaaggagctttcagcagctgaagctgaaaagaataagaagttgaatgat
gtgggatccaagactgaaccacgtgctggcagagtaatatcattaagtgacatactttac
cgctcagaggctaatagtgatgcttcacaagatggtcctagatctgacagagaagattct
gattatgatgaagaactagagttggattttgaaacatcaatgtcaggtgatgagggccgt
gatgctgaaccggttcatggaagtctgaatttgaggattcatagaaaagctggtagttct
aatggctcttgtggatctccatcttcttcccaaaatgacagaacaagttatcagccagaa
gcagtcatagatatgaaacagagatatgttggtcactgtaatgtaggaacagacattaaa
caggctagtttcttgggtcagaatggtgattatattgccagtggaagtgatgatggaaaa
tggtatatttgggaaaagaaaactggcagattggtcaaaatgcttgttggagacgaagct
gtggtaaattgtgtccagtgccatccatttgattcagttgtggctactagcggaattgat
aacacaataaagatttggactccaagtgctcccaccccgtcggtggcaggcggttcagcc
gaccttgatacagaaggttctgatgcagctaatgtctcggaagctatggaaggcaatcaa
cgcagattatgccagacacgtgaagctattctgccacttgagctgttggagaggtttcgc
atgcatgattttgccgaaggaacactgcatccctttgaatgcgctcagagctag
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