Caloramator sp. Dgby_cultured_2: PWK10_05930
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Entry
PWK10_05930 CDS
T09567
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
cald
Caloramator sp. Dgby_cultured_2
Pathway
cald02020
Two-component system
cald02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cald00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PWK10_05930
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PWK10_05930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cald03021
]
PWK10_05930
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
cald02035
]
PWK10_05930
Transcription machinery [BR:
cald03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PWK10_05930
Bacterial motility proteins [BR:
cald02035
]
Flagellar system
Flagellar assembly proteins
Stator
PWK10_05930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
UPF0122
Sigma70_ECF
HTH_23
MarR_2
PhyR_sigma-like
PTA_PTB
Motif
Other DBs
NCBI-ProteinID:
WDU83989
LinkDB
All DBs
Position
882960..883697
Genome browser
AA seq
245 aa
AA seq
DB search
MKCYKQFDEREEMILRYLPYVKYIASRLVAGKPPGVEFEDLVSYGIIGLIDAIEKFDPTK
GIKFETYATLRIKGAIIDELRKISWIPKSAVSKLSLLNQAREELESSLNREPTDKELADK
LNISEEELKTIESYVNYVSLVSLEEIFFKSDEEDMQVKDFVEDANSPHPETIVENEERLK
ILREAISMLPEKDKLILNLYYFEKLTLKEIGKILEVSESRVSQLHSRAIIRLRENLKRLK
YILEE
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgttataaacaattcgatgaaagagaggaaatgattttaaggtatcttccctat
gtaaaatatatagcttctcgccttgttgcaggaaagcctcctggagttgagtttgaggat
cttgtaagctatgggattataggactaatcgatgctatagaaaagtttgatccaacaaag
ggaataaagtttgaaacctatgccaccttaagaattaaaggggcaatcattgatgaactt
agaaagataagttggataccaaaaagtgcagtttcaaaactttccctccttaatcaggca
agggaagaattagaatctagtcttaacagagagccaacagacaaagagctagctgataaa
ttaaatatttctgaagaggaacttaaaactatagaatcctatgtaaattatgtatcttta
gtatccttagaggaaatattttttaaatcagatgaagaggacatgcaggttaaggatttt
gttgaggatgcaaacagcccacaccctgagaccattgtagagaatgaagaaagacttaag
attttgcgggaagctatttcaatgcttccagagaaggataaattgattttaaatctatat
tattttgaaaaacttactttaaaggagatagggaagattttggaagtgtcggaatccagg
gtatcacagcttcatagtagagctattatccgcctaagggaaaatctaaaaagacttaaa
tatatattggaggaatag
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