Caloramator sp. Dgby_cultured_2: PWK10_07250
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Entry
PWK10_07250 CDS
T09567
Name
(GenBank) S1 RNA-binding domain-containing protein
KO
K02945
small subunit ribosomal protein S1
K03527
4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:
1.17.7.4
]
Organism
cald
Caloramator sp. Dgby_cultured_2
Pathway
cald00900
Terpenoid backbone biosynthesis
cald01100
Metabolic pathways
cald01110
Biosynthesis of secondary metabolites
cald03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
cald00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
PWK10_07250
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
PWK10_07250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
cald03011
]
PWK10_07250
Enzymes [BR:
cald01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.4 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
PWK10_07250
Ribosome [BR:
cald03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
PWK10_07250
Bacteria
PWK10_07250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
LYTB
S1_RRP5
Spt6_S1
OB_RRP5_4th
MRP-S35
S1_RRP4
Motif
Other DBs
NCBI-ProteinID:
WDU84490
LinkDB
All DBs
Position
complement(1071746..1073209)
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AA seq
487 aa
AA seq
DB search
MNTICSATEIRQKETEDISKKVDLMIVIGGKNSSNTRKLYEISKENCSNVMLIENADELN
IEKIKQFNKIGITAGASTPQFVIEEVMNNLVSISNEDKITNDVFEKNKLETKIEDSNDMD
LDYFSDFIKIEVGDVVRGKVLHVTDEEVYFDIGYKSDGILPKEEASNLQINLKEKFKIGE
EYEVEIIKLNDGEGNVLLSRRSLEKEEFIENLKNYKHDGTLVDIEVIRVIKGGFECKIGE
LRCFMPLSHSGIDLVKDNPEDLVGKKLKANVLEVKEDGKIEIIVSRREVARHERQQRSRN
IILNLQEGMTQRGKVKTIIDSGVFVDTGDYDAFIPVSELSWKRIQKPSDVIKIGDIVEFI
IIKLDKALGKVTGSIKRTMETPWEKFIKKYSVEDIVEGKIVAFAEFGAFVELEEGVQGLV
HISNMSHIRINKPQDIAKIGQKVKVKIIDIDYENKRISLSIKDAKIAGENPAIFLLLYCI
FENSHII
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
attaatacaatttgtagtgccactgaaataaggcaaaaagaaactgaggatatatcaaaa
aaagttgacctaatgatagttattggtgggaaaaatagctcaaatacaagaaaactttac
gaaatttcaaaggaaaattgtagtaacgttatgcttattgaaaatgctgatgaacttaac
atagaaaaaataaaacaatttaataaaataggaataactgctggcgcatctactccacaa
tttgttatagaggaagtaatgaataatttggttagtatatcaaatgaagataagattact
aatgatgtttttgagaaaaataaattagaaactaaaattgaagattctaatgatatggat
ttagattattttagtgattttataaaaattgaagtaggagatgttgtaaggggtaaggtt
ctccatgttacagatgaagaggtgtattttgatataggctataaatccgatggaatttta
ccaaaggaagaagcatctaacttgcagattaatcttaaggaaaaattcaaaataggagaa
gaatacgaggttgagattataaagctaaatgatggagaaggaaatgttctattaagcaga
aggagtctagaaaaggaagaattcatagaaaacctaaagaattataaacatgatgggaca
ttagttgatatagaagttattagagtgattaagggaggatttgaatgtaaaataggagaa
ttaagatgctttatgcccctttcacactcaggcattgatttagtaaaggataatcctgag
gatttagttgggaaaaaacttaaggcaaatgttttagaagtaaaagaagatggtaaaatt
gaaataatagtatcaagaagggaagttgcaagacatgaaaggcaacaaaggtctaggaat
ataatattaaatcttcaggaaggtatgacacaaagaggtaaagttaagactataatagat
tctggtgtatttgtagatactggagattatgatgcctttatcccagtttcagaattatcc
tggaagagaattcaaaaaccaagcgatgtaattaaaataggagatatagtagaatttata
ataataaaattggataaagcattaggaaaggttactggaagcataaaacgaactatggaa
acaccttgggaaaagtttattaaaaaatactctgtagaagatatagtagaaggtaaaata
gtggcatttgcagaatttggagccttcgtagaattagaagaaggtgttcaaggcttagtt
catatatcgaatatgtctcatataagaataaataagcctcaggatattgctaagattggc
caaaaagtaaaagtaaaaataatagatattgattatgaaaacaaaagaatatcactatct
ataaaggatgcaaaaatagcaggtgagaatcctgctatttttttgctattatattgcatt
tttgaaaatagtcatataatataa
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