Caloramator sp. Dgby_cultured_2: PWK10_10990
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Entry
PWK10_10990 CDS
T09567
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
cald
Caloramator sp. Dgby_cultured_2
Brite
KEGG Orthology (KO) [BR:
cald00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cald03019
]
PWK10_10990
Messenger RNA biogenesis [BR:
cald03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PWK10_10990
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
Microcin
HDOD
PurK_C
TraI_2
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
WDU82228
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All DBs
Position
1604849..1605808
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AA seq
319 aa
AA seq
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MQLNVNQKFENIAVAVRQITRKTDQNNKNYYHLQVSIGLKNYDSKIWNDDEKIGEEIIPG
CLAYISGIARDFKGSLQLHISNIQRIWNPSQELLNSILPSGYVNENDMVLEINNIISTIS
NPFIKTLLENIFAMPDVKKHFYKKAAGAEIHHAYQGGLAQHTIEVVKLIQSYCKIFSYIK
YDIAVAAALLHDIGKIYELSSFPENKYTTKGRLLGHISLGADLVSRAISEIKDFPNDLKY
DLIHCILSHHGTLDMGSPVLPMTIEAIAVHNADKASAEINAFHLAIERDTGLDGWTEYNP
TYRRSIKNKKLPPLGVLLL
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgcagctaaatgtaaatcaaaaatttgaaaatatagctgttgctgtaaggcaaataact
agaaaaaccgaccaaaacaacaaaaactactaccatcttcaggttagcataggccttaaa
aactatgactctaaaatctggaacgatgatgaaaaaatcggcgaagaaattatccctggg
tgtcttgcctatatatcaggaatagcaagggattttaagggcagccttcagctgcacata
agcaacatccaaagaatatggaatccctcgcaggaacttttaaactccattcttccatca
ggctatgttaatgaaaacgatatggtccttgagataaataatattatatcaactataagc
aatccttttataaaaacccttttagaaaacatatttgcaatgccagatgttaaaaaacac
ttttataaaaaggcagcaggtgcagaaatacatcatgcctaccaaggtggccttgcacag
catacgatagaggttgtaaagcttattcaaagctactgtaaaatatttagctacattaaa
tacgacatagccgttgctgcggcactacttcatgacatcggtaaaatatatgaactttca
agctttcccgaaaacaaatatacaactaaaggacgtttactcggccatatttcccttggt
gcagaccttgtaagcagggcaattagcgaaataaaagattttccaaacgatttaaaatac
gaccttatccactgcattctatcccaccacggaacccttgatatgggctctccggttctt
cccatgacaatagaagcaatagcagtccacaacgccgataaagcaagtgcagaaataaac
gcctttcatcttgcaatagaaagggataccggccttgatggctggacagaatataaccct
acttatagaagaagtataaaaaataaaaagctaccccctttaggggttttgcttctttaa
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