Caloramator sp. E03: FDN13_00050
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Entry
FDN13_00050 CDS
T05994
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
cale
Caloramator sp. E03
Pathway
cale03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cale00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FDN13_00050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cale03021
]
FDN13_00050
03400 DNA repair and recombination proteins [BR:
cale03400
]
FDN13_00050
Enzymes [BR:
cale01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FDN13_00050
Transcription machinery [BR:
cale03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FDN13_00050
DNA repair and recombination proteins [BR:
cale03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FDN13_00050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Fungal_KA1
Motif
Other DBs
NCBI-ProteinID:
QCX32213
UniProt:
A0A5B7TFH3
LinkDB
All DBs
Position
8881..9099
Genome browser
AA seq
72 aa
AA seq
DB search
MSNSMINPPIMSLLNRVSDRYSLVVVTAKRARQIIDGKKPLVNIDSTKPVTIAINEINEG
KIHYENIKSGIK
NT seq
219 nt
NT seq
+upstream
nt +downstream
nt
atgagtaattctatgataaatccaccaattatgtcattattaaatagggtgagtgacaga
tattcccttgttgttgttactgctaaaagagcaaggcagattatcgatggtaaaaagcct
cttgtaaatatagactcaacaaaaccagtaactatagcaattaatgaaataaatgaaggt
aagattcattatgaaaatataaaatcaggtataaaatag
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