Caloramator sp. E03: FDN13_00060
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Entry
FDN13_00060 CDS
T05994
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
cale
Caloramator sp. E03
Pathway
cale03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cale00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FDN13_00060 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cale03400
]
FDN13_00060 (priA)
Enzymes [BR:
cale01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FDN13_00060 (priA)
DNA repair and recombination proteins [BR:
cale03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FDN13_00060 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
ResIII
DEAD
PriA_C
Helicase_C
Zn_ribbon_PriA
Sigma70_r4
Zn_ribbon_PF0610
NB-ARC
AAA_30
PIF1
AAA_11
Zn_ribbon_6
AAA_19
DUF5839
AbiEi_4
AAA_22
SMC_ScpB
TrmB
Viral_helicase1
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
QCX32215
LinkDB
All DBs
Position
10351..12765
Genome browser
AA seq
804 aa
AA seq
DB search
MAKIASVIVDNSAKALDKEFTYKIPEKLSNMINKGFRVVVPFGNANKYVEGIVVDIREEI
ENDIKLKEIADILDESPIFNENMIKIAMFLKQRYRCRFIDALKTLMPPGISAQEKLIINF
LSDKNYNYSNKIIETLRNYKSIEYKELCNILKYKVPRSLLYDMESNGIISIERVMKGRIN
TKKVDIYLPTDIKKCEEFIETCSQKLKKQGEVLKVIMLNDKPLTLKEISIVCGCSSSVVK
SLEKKGLIQKIEKETYRNPVKNDYFYERVELTEEQKKAIENIMENYKKGQNISLLHGVTG
CGKTEIYLNIVEKFIKMAYDAVVLVPEISLTPQTVERFKGRFGDVVAVLHSRLSDGERYD
EWRRIRKGEVKVVVGARSAIFAPLKNIKLIIIDEEHEYSYKSEMTPKYHAREVAEYIVNQ
NNGLLILGSATPSMESYYNAVNGKYNLVQILNRVDNKKLPIISVIDMKEEIKNGNKSMFS
KELYNSIYENLNKDEQTILFLNRRGYSTFISCRECGLILKCKNCDVPLTYHISSGKLNCH
YCGFEYEVPKLCPKCKSKYIKYFGAGTEKVENELKKYFPNARILRMDVDTTKNKGDHERI
YNEFKNNKADILIGTQMITKGMDFKNVTLVGVIAADTNLNIPDFRAAERTFQLICQVSGR
AGRGEKTGRVIVQTYDPQHYSISYASTHDYVGFYNKEIIIRKMLNYPPFSDMLYVLLTSE
NEQELIEFAQKIKGELKTIAEGKRVEVIGPAPCHLYKIKKSYRWHIIIKGNVFDIYDELD
NRLNFYTINTKIYYTLDINSYNMI
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaatcgcatcagttatagttgataattcggctaaagctttagacaaagaattt
acatataaaatacctgaaaaactttctaatatgataaataagggctttagagttgtagtt
ccttttggaaatgcgaataaatatgttgaaggaattgtagttgatataagggaagaaata
gaaaatgatataaaattaaaagagatagctgatatacttgatgaatcgccaatatttaat
gaaaacatgattaaaattgctatgtttttaaaacaaagatatagatgtagatttatagat
gctttaaaaactttgatgccaccaggcataagtgcacaagaaaagcttataataaatttt
ttatctgataaaaactataattatagcaataaaataattgaaactttaaggaattataag
tcaatagagtataaagaattatgtaacattctcaaatataaagtacctcgttctttgctt
tatgatatggaaagtaatgggataatatctattgaaagagttatgaagggaagaataaat
acaaaaaaagtagatatttatttaccaacagatataaagaaatgtgaggaatttatagaa
acctgttcacaaaaactaaaaaaacagggtgaagttttaaaagtaataatgcttaatgat
aaacctttaacattaaaagaaatttctatagtatgcggttgtagcagttctgttgttaag
agcctcgaaaaaaaagggttaattcaaaaaatagaaaaagaaacatatagaaatcctgtt
aaaaatgattatttttatgaaagagttgaactaacagaggaacaaaaaaaggccattgaa
aatataatggaaaattacaaaaaaggtcaaaatatatctcttttgcatggagttaccggc
tgtggtaagactgagatataccttaacattgttgagaaatttataaaaatggcctatgac
gcagttgttcttgtacctgagatatcattaacacctcaaacggttgaaagatttaaggga
agatttggtgatgtagttgcagtacttcatagtagattatctgatggagaaagatatgat
gaatggagaagaataagaaaaggagaagttaaagtagtagttggggcaagatctgcaata
tttgctcctttgaaaaatataaagcttattataattgacgaagaacatgaatattcatat
aaatcagagatgacacctaaatatcatgcaagggaagttgctgaatacatagttaaccag
aataatgggcttttaatattaggttctgcaacgccttctatggaaagctattataatgca
gtaaatggtaaatacaatcttgttcagattttaaatagagtagacaataaaaagttacct
ataatatcggttatcgatatgaaagaagaaattaaaaatggaaataaatccatgtttagt
aaagaactatataattcaatttatgaaaatttaaataaagatgagcaaactatattgttt
ttaaatagaagaggatattcaacatttatatcctgcagagaatgtggcttaatattaaaa
tgtaagaactgtgatgttcctttaacatatcatataagcagtgggaagctaaactgtcat
tattgtgggtttgagtatgaggttcctaaactttgtccaaaatgtaagagtaaatatatt
aaatattttggtgcaggaacagaaaaggtagaaaatgaattaaaaaaatactttccaaat
gcaaggattttgagaatggatgttgatacaacaaaaaacaaaggcgaccacgaaaggata
tacaatgaatttaaaaataacaaagcagatatattaatcggaacccagatgataacaaaa
ggaatggattttaaaaatgttactttagtaggagttattgctgcggatacaaatcttaac
ataccagattttagagcagcagaaagaacttttcaactgatttgccaggtttcaggtaga
gctggaagaggagagaaaactggcagagttattgtacaaacttatgacccacagcattat
agtatttcctatgcaagtacacatgattatgtaggattttataataaagaaattataata
agaaaaatgttaaattatcctcctttttctgatatgctttatgttcttttaacttcagaa
aatgagcaggaacttatagaatttgcacaaaaaataaaaggagaattgaaaactattgca
gaaggtaaaagagtagaagttatagggcctgctccatgccatttatataaaataaaaaaa
tcctatagatggcatataattataaagggaaatgtttttgatatatatgatgaattagat
aacagattaaatttttatacaataaatactaaaatttattatactttagatattaattca
tataatatgatttag
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