Caloramator sp. E03: FDN13_00310
Help
Entry
FDN13_00310 CDS
T05994
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cale
Caloramator sp. E03
Brite
KEGG Orthology (KO) [BR:
cale00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cale03032
]
FDN13_00310 (topA)
03400 DNA repair and recombination proteins [BR:
cale03400
]
FDN13_00310 (topA)
Enzymes [BR:
cale01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FDN13_00310 (topA)
DNA replication proteins [BR:
cale03032
]
Prokaryotic type
DNA Topoisomerases
FDN13_00310 (topA)
DNA repair and recombination proteins [BR:
cale03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FDN13_00310 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Zn_ribbon_ACC
Auto_anti-p27
HVO_2753_ZBP
DUF7340
Zn_ribbon_PaaD
Toprim_4
DNA_ligase_ZBD
Motif
Other DBs
NCBI-ProteinID:
QCX32260
UniProt:
A0A5B7TFL1
LinkDB
All DBs
Position
57447..59519
Genome browser
AA seq
690 aa
AA seq
DB search
MAQSLVIVESPSKAKTIGKFLDKNFKVKASMGHVRDLPKSQIGVDIENNYTPKYITIRGK
GKLIDELKKEAKKSDKIFLATDPDREGEAISWHLATILGLDDNEKCRIEFHEITKKAVFE
AINKPRAINKNLVDAQQTRRILDRLVGYKISPILWRKVKWGLSAGRVQSVAVRLICDREK
EIKDFIPKEYWSLTAKFKEANKTFEAKFYGINNKKISIDSEEQVNSIINEIKNSEFRVED
IKNQERKKNPLPPFITSTLQQEAYKKLNFTTKKTMSIAQQLYEGIDLKNEGTVGLITYMR
TDSVRISSEAQESALKYIKIKYGDNYIPAIKRNYKTKENAQDAHEAIRPTMVEREPDSIK
DSLTNDQYKLYNLIWSRFIASQMSEAVFDTITVDIKAKDYLFKANGSTMKFPGFLTVYKT
EEDEEEENKIPKLENGQVLCLKSLDPAQHFTQPPARYTEATLVKALEENGIGRPSTYAPI
ISTILERGYVVKEKKSLYPTELGIVVTDLLKEYFKDIVDVEFTAQMENKLDEIEDGKAYW
IKIVDDFYRPLKSQIESAEEKISKIDIEEQVEVTDVKCDKCGRNMVIKRGKFGKFLACPG
YPECKNTKPLVEEIDVPCPKCGSKVVIRKSKKGKIFYGCSRYPECNFVSWYKPTNEKCPN
CGEILYEKNLKGQKQFICLNEECKYKKTER
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggctcagtcccttgttattgttgaatcaccttctaaagcaaaaactataggaaaattc
ttagataaaaactttaaagttaaagcatcaatgggacatgtaagggatctgcctaagagc
caaataggtgttgatattgagaataattatacgcctaaatatataactattagaggtaaa
ggcaaacttatagatgaactcaaaaaagaagcaaaaaaatctgataaaatatttttggcg
acagaccctgatagggaaggagaggcaatatcttggcatcttgcaacaattcttggactt
gatgataatgaaaaatgcaggattgaatttcacgagataactaaaaaagctgtatttgaa
gcaataaataagccaagagctataaataaaaatcttgtcgatgcccagcaaacaaggaga
atattagatagacttgttggatataagataagcccaattttatggagaaaagtaaaatgg
ggacttagcgctggaagagttcagtcggttgccgtaagacttatatgtgatagagaaaaa
gaaataaaagattttataccaaaagaatattggtcccttactgcaaagtttaaagaagca
aataagacatttgaagctaaattttatggtataaacaacaaaaaaatttcaattgattca
gaagaacaagttaatagcataattaatgaaattaaaaatagtgaatttagagtagaagat
attaaaaatcaagaaagaaagaaaaatccacttccgccttttattacaagtacgcttcaa
caggaagcttataagaaacttaattttacaactaaaaaaactatgtcaattgcacagcaa
ctttatgaaggcatagatttaaaaaatgaaggtactgtagggcttattacatatatgaga
actgattcagttagaatttctagcgaagctcaagaaagtgctttaaaatatattaagata
aaatatggagataattatatacctgcaataaaaagaaattataaaacaaaagaaaatgca
caggatgctcatgaagcaataagaccaactatggtagaaagagaacctgatagcataaaa
gattctttaactaatgatcaatataagctgtataatcttatatggtcaagatttattgca
agccaaatgtcagaagctgtttttgatacaattactgttgacataaaagcaaaagactat
ttatttaaagcaaatggaagtacaatgaaatttcctggttttttaacagtatataaaaca
gaagaggatgaggaagaagaaaataaaataccaaagcttgaaaatggtcaagttttatgt
ttaaaatccctagatccagctcaacattttactcaacctccagcaagatatacagaagct
actcttgttaaagcattagaagaaaatggaattggaagaccaagtacttatgctcctatt
ataagtacgatattggaaagaggatatgtagtaaaagaaaaaaaatcattatatcctaca
gaacttggtattgttgtaacggacttattaaaagaatactttaaagatatagttgatgtt
gaatttactgctcaaatggaaaataaattagatgagattgaggatggaaaagcatattgg
ataaaaattgttgacgatttttatagacctttaaagagtcaaattgaatctgcagaagag
aagataagtaagatagatatcgaggaacaagtagaagttacagatgttaaatgcgataaa
tgtggaagaaatatggttataaagcgtggtaaatttggtaaattccttgcatgtcctggg
tatcctgaatgcaaaaatactaaacctcttgttgaagaaatagatgttccatgtcctaaa
tgtggatcgaaggttgttataagaaaaagtaaaaaaggcaaaatattttatggatgtagc
agatatcctgaatgtaactttgtaagttggtataagcctactaacgaaaaatgtcctaat
tgtggtgaaatactctatgaaaaaaatttaaaaggtcaaaaacagtttatatgcttaaat
gaagaatgcaaatataaaaaaactgaaaggtga
DBGET
integrated database retrieval system
