Caloramator sp. E03: FDN13_01670
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Entry
FDN13_01670 CDS
T05994
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cale
Caloramator sp. E03
Pathway
cale03030
DNA replication
cale03410
Base excision repair
cale03420
Nucleotide excision repair
cale03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cale00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FDN13_01670 (polA)
03410 Base excision repair
FDN13_01670 (polA)
03420 Nucleotide excision repair
FDN13_01670 (polA)
03440 Homologous recombination
FDN13_01670 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cale03032
]
FDN13_01670 (polA)
03400 DNA repair and recombination proteins [BR:
cale03400
]
FDN13_01670 (polA)
Enzymes [BR:
cale01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FDN13_01670 (polA)
DNA replication proteins [BR:
cale03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FDN13_01670 (polA)
DNA repair and recombination proteins [BR:
cale03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FDN13_01670 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FDN13_01670 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH_2
DUF5607
Motif
Other DBs
NCBI-ProteinID:
QCX32508
UniProt:
A0A5B7TG05
LinkDB
All DBs
Position
complement(308329..310923)
Genome browser
AA seq
864 aa
AA seq
DB search
MLGEIIVNKEKLVILDGNSLLNRAFYALPPMTTSKGEPTGAVFGFTTMLLKIYDEIKPDY
IAVAFDKSKVTFRHKEYEEYKAGRKKMPEELSKQFEPVKRLLNAFNIGIFELEGYEADDI
IGTISKRFESENLEVIIYTGDRDALQLVSDYTKVVITKKGISETDICDKEFIMEKYGLEP
KGIIDLKGLMGDSSDNIPGVPGVGEKTALKLLHEYKTIENVFNNVENINGKKLKETLMQH
KEQAFLSKRLATINRDVPIDIDLNKIRTKDYDVLQIKQLFSELEFKSLMERINTVTLNNA
KINKEIKCEIKPYERDIKIINKIVEEKVFNFIFIYDDNKEVEGMIINGQYFVSDSFITDF
KEVFESEAVGKNTYRAKYVYNYLISKGIKLNNLAFDAEIAAYILNPTENSYDLVNILKNF
AGILYDEDLNDIKQLGALFIENFDAIKENMLNKIDNLQMNTLFKEVEMPLIKVLANMEIR
GFKVNRETLHNIGFELSEEIDRLTGEIYDLAGEEFNINSPKQLGVILFEKLNLPVIKKTK
TGYSTDAEVLDELYDKHEIVEKILNYRQMVKLKSTYVDGLLACISEDNKIHSSFNQTVTA
TGRISSTEPNLQNIPIKMEQGRQIRKAFEPSSLDYVILSADYSQIELRVLAHISKDDNLI
DAFRNNQDIHRRTASEIFGVSMEEVTPLQRSRAKAINFGIVYGLGDFSLAKDLKISRKEA
KSYIENYFKRYEGVRKYLDSAIEEGRKNGYVKTILNRVRYIPEINSSNRTLRAFGERLAM
NTPIQGSAADIIKIAMVNVDRRLEDEMLRSRLLLQVHDELVLEVHKDELQYVAEMVKEEM
ENAVELLVPLVAEVKWGKDWYEAK
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgttaggagagattatagtgaataaggaaaaacttgtaatattagatggaaatagctta
ttaaatagagcattctatgctctccctcctatgacaacttcaaagggggagccgacagga
gcggtatttggatttactacgatgcttttaaaaatctatgatgaaataaagccggattat
atagctgtagcctttgataaatcaaaagtaacctttaggcacaaagaatatgaagaatat
aaagctggaagaaagaagatgccagaggagctatcaaagcagtttgaaccagtaaaaagg
cttcttaatgcttttaacataggaatatttgaactagaaggttatgaggctgatgatata
attggaacaatatctaaaagatttgaaagtgaaaatcttgaggttattatatatacagga
gacagagatgcccttcaacttgtatctgactatacaaaggttgtgataactaaaaaaggt
atctctgaaacggatatttgcgataaagagtttataatggaaaaatacgggctcgaacct
aaaggaattatagatttaaaaggacttatgggagattcttcagataatattccaggtgtt
cctggtgttggagaaaaaactgccttaaaactgctacacgaatataaaactattgaaaat
gtgtttaataatgttgaaaatataaatggtaaaaagctaaaagaaactcttatgcagcat
aaagaacaggcttttttaagtaaaaggcttgcaacaataaatagagatgtacctattgat
attgatctgaataaaataagaacgaaagactatgatgttttacagataaagcagttattt
tctgaacttgaatttaaaagtttgatggagagaataaataccgtaacactaaataatgcc
aagataaataaagaaataaagtgtgaaataaagccttatgaaagagacattaaaataatc
aataaaatagttgaagagaaagtatttaattttatttttatatatgacgataataaagaa
gttgaaggaatgataattaacgggcagtattttgtttcagatagctttatcactgatttt
aaggaggtttttgaatctgaagcagtaggtaaaaatacatatcgtgcaaagtatgtatac
aattatttaatcagtaaaggtattaaattgaataatttagcttttgatgctgaaattgca
gcatatattttaaatccgacagaaaatagttatgatttagtaaatatattaaaaaacttt
gcaggtatattgtacgatgaggatttaaatgatataaaacaattaggagcactatttatt
gaaaattttgatgctattaaggagaatatgctaaataaaattgataatttacagatgaat
acacttttcaaagaagttgaaatgcctttaattaaagttttagctaatatggagattaga
ggctttaaagtgaacagggaaactttacataatattggatttgaattaagtgaggaaata
gatagacttactggggaaatatatgacttggcgggagaagaatttaatataaactctcca
aaacagctaggggttattttgtttgaaaagcttaacttaccagtaattaaaaaaacaaaa
actggttattcaactgatgctgaggtattagatgaactttatgataaacatgagatagtt
gagaagattttaaactatagacaaatggtaaaattaaaatcaacttatgtagatggatta
cttgcatgtatttcagaagataacaaaattcattcaagttttaatcagactgttactgca
acaggaagaatttcaagtacagaacctaatcttcaaaatatacctataaaaatggagcag
ggaagacaaataagaaaagcttttgaaccttcgtctttggattatgttatactatctgct
gattattctcagatagagcttagagtccttgctcatatatcaaaggatgataatttgata
gatgcttttagaaataatcaggatatacataggagaacggcatcagaaatttttggagta
tctatggaagaggttacccctctgcaaagaagcagagctaaggctattaattttgggata
gtatatggtcttggtgactttagtcttgctaaagatttaaaaataagtagaaaggaagct
aagagttatatagaaaattattttaaaagatatgaaggagtaagaaaatatttagatagt
gcaatagaggaagggcgtaaaaacggatatgtaaagacaatattaaacagggtaagatat
ataccagaaataaattcaagcaatagaacgcttagggcatttggggaacgccttgctatg
aatactcctattcaggggtcagcagctgatataataaaaatagccatggttaatgttgat
agaaggcttgaagatgaaatgctaagatcaagacttttgctacaggtgcatgatgagctt
gttttagaggtccataaggatgagttgcagtatgtagcagaaatggttaaagaagaaatg
gaaaatgcggttgagcttttagttccattagtagctgaggttaaatggggaaaagattgg
tatgaggcaaagtag
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