Caloramator sp. E03: FDN13_01935
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Entry
FDN13_01935 CDS
T05994
Name
(GenBank) RluA family pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
cale
Caloramator sp. E03
Brite
KEGG Orthology (KO) [BR:
cale00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cale03009
]
FDN13_01935
Enzymes [BR:
cale01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
FDN13_01935
Ribosome biogenesis [BR:
cale03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FDN13_01935
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
RelA_RIS
AF1636
Big_8
Motif
Other DBs
NCBI-ProteinID:
QCX32551
LinkDB
All DBs
Position
complement(361826..362740)
Genome browser
AA seq
304 aa
AA seq
DB search
MKLINLEVDFEDADKRIDIYISKKIEDVSRTQVQKLIDEGKILVEGKKIKSNYKVKAGDK
IEIEIPDPVKIDIVPEDIDIEILYEDEDIAVVNKPQGMVVHPAAGNYTGTLVNALLARCS
NLSGINGEIRPGIVHRIDKDTSGVLVIAKNDIAHKKLAEQIKEHSVNRIYVALVEGIIKN
DSGVINLPIGRHPVERKKMAVVKNGGRNAVTHFKVIERYKENTLIQAKLETGRTHQIRVH
LAHIGHPLVGDPVYGYKKQKYKLKGQALHAMTLGFIHPTKGEYMEFSAPLPDYFNELIKK
LRNS
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgataaatttagaagtcgattttgaagatgcagataaaaggatagatatttat
ataagtaaaaagatagaagatgtatcaagaacacaggtacaaaagcttatagatgaaggt
aagattcttgttgaagggaaaaagataaaaagcaactataaagtaaaggcaggagataag
atagagattgaaataccagatcctgttaaaatagatattgtgccagaggatatagatatt
gaaatactttatgaggatgaggatattgcggttgtaaacaaacctcagggtatggtagtt
catcctgcagctggaaattatactggaacacttgttaatgctctacttgcaaggtgtagc
aatttatcaggtattaacggagaaataagaccgggaattgttcatagaatagataaggat
acatcaggagttttagttatagctaaaaatgatatcgctcataaaaaattagcagaacag
ataaaagagcacagtgtaaatagaatatatgttgcattggttgaaggaataataaagaat
gatagtggggtaataaatcttccaataggtaggcatcctgttgaaagaaagaaaatggcc
gttgtaaaaaatggtggaaggaatgcagttactcattttaaagttattgagagatataag
gaaaatactttgattcaagcaaagcttgaaactggaagaacacaccagataagagttcat
ttagcgcatattggtcatcctcttgttggagatcctgtatatggctataaaaaacagaaa
tataagcttaaagggcaagcccttcatgctatgacattaggttttattcatccaacaaag
ggagagtatatggagttttcggcaccactgccggattattttaatgaacttattaaaaag
cttaggaatagttga
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