Caloramator sp. E03: FDN13_03110
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Entry
FDN13_03110 CDS
T05994
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
cale
Caloramator sp. E03
Pathway
cale00260
Glycine, serine and threonine metabolism
cale00460
Cyanoamino acid metabolism
cale00630
Glyoxylate and dicarboxylate metabolism
cale00670
One carbon pool by folate
cale00680
Methane metabolism
cale01100
Metabolic pathways
cale01110
Biosynthesis of secondary metabolites
cale01120
Microbial metabolism in diverse environments
cale01200
Carbon metabolism
cale01230
Biosynthesis of amino acids
cale01240
Biosynthesis of cofactors
cale04981
Folate transport and metabolism
Module
cale_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
cale00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FDN13_03110
09102 Energy metabolism
00680 Methane metabolism
FDN13_03110
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FDN13_03110
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
FDN13_03110
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
FDN13_03110
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
FDN13_03110
Enzymes [BR:
cale01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
FDN13_03110
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
OKR_DC_1
ZinT
Motif
Other DBs
NCBI-ProteinID:
QCX34771
LinkDB
All DBs
Position
complement(594350..595579)
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AA seq
409 aa
AA seq
DB search
MENIRKIDSEIYEAILNEMSRQQNKIELIASENFTSKAVMEAQGSQLTNKYAEGYPKKRY
YGGCEYVDVVEDLARERLKKLFNAEHANVQPHSGSQANMGVYFTVLEPGDKVLGMNLSHG
GHLTHGSPVNFSGKLYNFISYGVNEEGYIDYDELRKMALKEKPKMIVSGASAYPRIIDFK
RIREICDEVSCYMMVDMAHIAGLVAAGLHPNPVEYADFVTTTTHKTLRGPRGGAILCKEK
YAKAIDKSIFPGIQGGPLEHVIAAKAVCFKEAMADEFKEYQKKVLENAKTLAKALMDRDF
KLVSGGTDNHLMLIDLRNKNITGKDAEHILDEVGITVNKNTIPFDPESPFVTSGIRIGTP
AVTTRGFGKEEMIAIADIINWVIENRDKDLKPARDRVKKICESFPIYKD
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaacataagaaaaatagatagcgaaatctatgaagctatcctaaatgaaatgagt
aggcaacagaataaaattgagctaattgcttccgaaaactttacaagtaaggcagttatg
gaagcacagggttcacagctaacaaataaatatgctgaaggttatcccaaaaaaaggtat
tatggtggctgtgaatatgtcgatgtcgttgaagaccttgcaagagaaagattaaaaaaa
ttatttaatgcagaacatgccaacgttcagcctcattcgggctcacaggcaaatatggga
gtttattttactgttcttgaaccaggtgataaagtacttggaatgaatctttcccatgga
ggacatttaacccatggaagtccagttaatttctctggtaagctttataacttcatttcc
tatggagttaatgaagagggatacatagattacgatgaattgagaaagatggctttaaag
gaaaagccgaagatgatagtatcaggcgcaagtgcatacccaagaattattgattttaaa
agaattagggaaatatgcgatgaagtttcatgctatatgatggttgatatggctcatatt
gcaggtcttgttgcagcaggactgcatccaaatcctgtagagtatgcagattttgtaaca
acaactactcacaagacactgagaggaccaagaggtggagctatactttgtaaagaaaag
tatgcaaaggctatagacaaaagcatatttccaggaatacaaggagggccactggaacac
gttatagctgcaaaagctgtttgctttaaggaagctatggcagatgaatttaaggaatat
caaaagaaagtattagaaaatgctaaaactcttgccaaagcattaatggatagagatttt
aaacttgtatctggtggaactgataatcatcttatgttaattgatttgagaaataaaaat
ataacaggtaaagatgcagagcatattcttgatgaagtaggaattactgtaaacaagaat
acgattccatttgatcctgaaagcccttttgtaacaagtggaataaggattggaactcct
gctgttactacaagaggatttggaaaagaagagatgattgcaattgcagatattataaat
tgggtaattgaaaatagagataaggatttaaaacctgcaagggacagggtaaagaaaatt
tgtgaaagttttccaatttataaggattga
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