Caloramator sp. E03: FDN13_04450
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Entry
FDN13_04450 CDS
T05994
Name
(GenBank) RluA family pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
cale
Caloramator sp. E03
Brite
KEGG Orthology (KO) [BR:
cale00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cale03009
]
FDN13_04450
Enzymes [BR:
cale01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
FDN13_04450
Ribosome biogenesis [BR:
cale03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FDN13_04450
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QCX33021
LinkDB
All DBs
Position
complement(870971..871936)
Genome browser
AA seq
321 aa
AA seq
DB search
MNEIVIKANEAGQRLDRFLRKYLKDMPLGTIYKAIRKKEITVNGNKSSEKYLLSEGDIIR
FNFEVEAKKENKKLKFLNIDYSIDTAYEDENLLVVIKGTDTLVHPDEGEDITLTDMVLAY
LYDKGEYNPNKEVTFSPSPCNRLDRNTSGLVIFAKNYETLKAINEMIRDGNVKKYYTAIV
KGKIKDDTYSAYILKDNKTNKSVISRDYIKNSKKIETKIINIESVGQFSHIDIDLITGRS
HQIRAHLSWLGNPILGDPKYGDKKLNSFFFNKYGLSNQLLIAYKLIFVNCPNSLKYLENK
TITMHYPALFKKIKKDIFKVI
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagatagttattaaagcaaatgaagcaggacaaaggcttgataggtttttaaga
aaatacttaaaggatatgccacttggaacaatttacaaagccattagaaaaaaagaaata
actgtaaatggaaataaatcaagtgagaaatacttattatcagaaggagatattattagg
tttaattttgaagttgaagctaaaaaagaaaataaaaaattaaaatttttaaatatagat
tatagcatagatacggcttatgaagatgagaatttattggttgttataaagggaacagat
actcttgttcatcctgatgaaggagaagatataactttaactgatatggttttagcttat
ctttatgataaaggggaatataacccaaataaagaagttactttttcaccttcgccttgt
aatagacttgatagaaatacatctggacttgttatatttgcaaaaaactatgaaactttg
aaggcaataaatgaaatgattagagatggaaatgttaaaaaatactatactgcaattgta
aaaggaaaaataaaagatgatacctatagtgcatacatattaaaagataataaaacaaac
aaatctgtaataagcagggattatattaaaaactcaaaaaaaattgaaactaaaattatt
aatatagaaagcgttggacaattttcacatattgatatagacctgattactggtagaagc
catcaaataagagcacatctatcatggcttgggaatcctatattaggtgatcctaagtat
ggagataaaaaattaaatagtttcttttttaataagtatggtctttcaaatcaactcctt
atagcttataagttgatatttgtaaactgccccaatagccttaaatatcttgaaaataaa
acaattacaatgcactatccagctttgtttaaaaagataaaaaaggatatatttaaagtt
atttaa
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