Caloramator sp. E03: FDN13_04510
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Entry
FDN13_04510 CDS
T05994
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
cale
Caloramator sp. E03
Brite
KEGG Orthology (KO) [BR:
cale00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cale03019
]
FDN13_04510
Messenger RNA biogenesis [BR:
cale03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FDN13_04510
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
HDOD
tRNA_anti-codon
TraI_2
YfbR-like
Motif
Other DBs
NCBI-ProteinID:
QCX33031
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All DBs
Position
885212..886168
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AA seq
318 aa
AA seq
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MYNIKRGDFMLCLNPNDKIECQPFIVRKIYKKVSQNKKEYYHLQISHGIKNYDAKIWNFK
DEISVNITPGCFANVWGTVKDFKGNLQIHIDKILKIENPDEDLIQQITPTCNTDPLKLEI
EINKLISSVKHPKLNSLLNSIFNLPEIINNFYLKAAGAEIHHAYIGGLAEHTIEVTKIVI
FLCNIYNYINRDLAVTASLLHDIGKVIELSNFPENKYTDAGRMLGHIYLGTDLISAEANK
IADFPNDLLLDLKHCILAHHGTLEMGSPVVPMTIEAIALHNADKMSAEINGFNLAIQRDT
NTGNWTEFNNIYKRYIKK
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgtataatataaaaagaggtgattttatgctatgcttaaatcctaacgataaaattgaa
tgtcaaccttttattgtaagaaaaatttacaaaaaagtaagtcaaaataaaaaagaatac
tatcatcttcaaataagccacggaattaagaattatgacgccaagatttggaattttaaa
gatgaaatatctgtgaatataactccaggatgctttgcaaatgtatggggaacagttaaa
gattttaaaggtaatctacaaatacatattgataaaatattgaaaattgaaaaccctgat
gaagatctaatacaacaaataaccccaacttgtaatacagatcctttaaagcttgagata
gaaataaacaaactaatatcatcagtaaaacatccaaaattaaattctttattaaattca
atatttaacttacctgaaataataaataatttttatttgaaagcagctggtgctgaaata
caccatgcttatattggaggccttgcggaacatactattgaagttacaaaaatagtaata
tttctctgcaatatatataattacataaatcgtgatttggcagttactgcttctctacta
catgatataggaaaagttattgagttatcaaattttcctgagaataaatataccgatgca
ggcagaatgcttggtcatatatatttaggtactgatttgataagtgctgaagctaataag
attgcagattttcctaatgatcttctgctggacttaaaacattgtatattagcccatcat
ggtacacttgagatgggatcccccgtagttccaatgacaattgaagctatagctttacat
aatgcggataaaatgagtgctgaaataaatggatttaatcttgcaatacagagagatacc
aacacaggaaactggacagaatttaataacatatataaaagatatataaaaaagtaa
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