Caloramator sp. E03: FDN13_09545
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Entry
FDN13_09545 CDS
T05994
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
cale
Caloramator sp. E03
Pathway
cale03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cale00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FDN13_09545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cale03400
]
FDN13_09545
Enzymes [BR:
cale01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FDN13_09545
DNA repair and recombination proteins [BR:
cale03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FDN13_09545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
OB_YrrC
UvrD_C_2
HHH_5
AAA_11
HHH_2
Viral_helicase1
HHH
PIF1
nSTAND3
Helicase_RecD
PhoH
SLFN-g3_helicase
NTPase_1
AAA_23
AAA_22
AAA
ATPase_2
DNA_pol_lambd_f
NPHP3_N
HerA_C
UvrD-helicase
AAA_28
TFA2_Winged_2
T2SSE
DEAD
AAA_16
UvrD_C
AAA_29
ABC_tran
MeaB
MobB
TrwB_AAD_bind
ABC_ATPase
Thymidylate_kin
SRP54
DUF2442
Motif
Other DBs
NCBI-ProteinID:
QCX33925
UniProt:
A0A5B7THV1
LinkDB
All DBs
Position
1940416..1942635
Genome browser
AA seq
739 aa
AA seq
DB search
MVEIEGTVVSIVYRNDDNGYTVAKIKHGKNTESVVGYMPFLNEGQRARFFGEWTIHQTFG
QQLKVESFEEIMPATLEGVEKYLASGLIPGVGPATAKRIVEKFGMDSLDIIEMNPMKLME
IEGIGEKKAKSIAEAFKEQRELREVLVSLQSYGISVTYGIKIYRKYGKDTFNLIKENPYR
LCDDIDGIGFKTADKIARNLGVDLNSIHRVMAGIKYVLAGCIANGHVYLPKLTLLDECVA
LLNVSVEIVEEALTSLIVSKQVYIDDIEGETAVYLSSLYYSELGVARRIIELSLNKVKDD
FKDVEEDIKEFEKENNIEFAIEQKEAVIQAVKNGVCIITGGPGTGKTTIIKCIIEIFKKK
GMEVVLAAPTGRASKRITEATGYEAKTIHRLLEMEYVMGENYPEFSRDEGNPLECDAVII
DEASMVDILLMNSLLKAMPLGCRLIMVGDVDQLPSVGPGNVLRDIIESQVLSVVRLNKIY
RQADESLIAINAHRINSGQMPILNDREKDFFFIQVGNPSDMVEEIVRLVDIRLPSFKEGF
DPMRDIQVLSPTRKGEVGIYNLNIKLQQVLNPKSSQKAEKQFRDFIFRVGDKVMQIKNNY
SLKWQSISNENETGMGIFNGDIGFIEEVDNENQTLTVIFDDDKRVVYDFTNLDELEMAYA
VTIHKSQGCEFPVVVIPVFYGPPMLMTRNLIYTGVTRAKKLVVLVGLSRALCNMINNDTI
AKRYTGLKKRIISYVNVIR
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggttgaaatagaaggtacagttgtaagtattgtatataggaatgatgataatggatat
actgtagcaaagattaaacatgggaaaaatactgaatcggttgttggctatatgcccttt
ttgaatgaaggccaaagggcaaggtttttcggtgaatggacaatacaccaaacctttggt
cagcagcttaaagttgaaagttttgaagaaataatgcctgctactttagagggagttgaa
aaataccttgcaagtggtcttattcctggggttggtcctgcaactgcaaagagaattgtt
gagaaatttggaatggattcacttgatattattgaaatgaaccctatgaagcttatggag
attgaaggtattggagagaagaaggcaaaaagtattgcagaggcctttaaagagcaaaga
gagctaagggaagttttagtttcccttcaaagctatggtatatctgtaacttatggaatt
aaaatatatagaaaatatggtaaagatacttttaatttaataaaagaaaatccttatagg
ctttgtgatgacatagatggtatagggtttaaaacagccgataaaattgcaagaaacctt
ggtgttgatttaaattctattcatagagttatggcaggtataaaatatgttttagctggc
tgtattgcaaatggacatgtatatcttccaaagctgactcttcttgatgaatgtgttgct
cttttaaatgtttcagttgaaatagttgaagaagcgcttacatctcttatagtttccaaa
caagtttatattgatgatatcgagggcgaaacagcagtttacttatcctcactttattat
tcagaacttggagtggcaaggaggattattgagctttctttaaataaagtaaaagatgat
tttaaggatgtagaagaggatataaaagaatttgaaaaggaaaataatatagagtttgcg
atagagcaaaaagaagcagtaatacaggcggttaaaaatggggtttgtattataactgga
ggccctgggacagggaagacaacaataataaaatgtataattgaaattttcaagaaaaag
ggaatggaagtagtacttgctgcaccaacaggtagggcatcaaagaggataacggaagca
acaggctacgaggcaaagacaatacacagacttttagagatggaatatgttatgggagag
aattatcctgaattttcaagggatgagggtaacccattagaatgtgatgccgttataata
gatgaggcttctatggttgatatacttttgatgaactcccttttaaaggcaatgccttta
ggatgcaggcttattatggttggagatgtggatcagcttccatctgtaggcccaggcaat
gtcttaagggatataatagaaagtcaagtacttagtgttgtaaggctaaataaaatatat
agacaggctgatgaaagccttattgctataaatgctcataggataaacagtggtcaaatg
ccaatattaaatgacagggagaaggattttttctttattcaagttggtaatccttcagac
atggttgaggagattgttaggcttgttgatataagactgccatcctttaaggaaggattt
gatcctatgcgggatatacaggtattatcaccaacgagaaagggagaggttggcatatat
aacttaaatataaaacttcagcaggttttaaacccaaaatcaagccaaaaggcagaaaaa
cagtttagagattttatatttagagttggagataaggtaatgcagattaaaaataactac
agcttaaagtggcagagtatctccaatgaaaatgaaactgggatgggaatttttaatgga
gatataggctttatagaggaggttgataacgaaaatcaaactcttacagttatattcgat
gatgataaaagagttgtatatgattttacaaatttagatgagcttgaaatggcttatgca
gtaactatacataaaagccagggttgtgaatttcctgtggttgtaattcctgttttttat
ggtcctcctatgcttatgacaagaaatcttatatatactggggttaccagggccaaaaag
cttgttgtattggttggattgagcagagctttatgtaatatgataaataatgatactatt
gctaaaagatatacagggctaaaaaagagaataatttcttatgttaatgttataagatag
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