Coraliomargarita algicola: SH580_01575
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Entry
SH580_01575 CDS
T10130
Name
(GenBank) class I SAM-dependent RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
calg Coraliomargarita algicola
Brite
KEGG Orthology (KO) [BR:
calg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
calg03009
]
SH580_01575
Enzymes [BR:
calg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
SH580_01575
Ribosome biogenesis [BR:
calg03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SH580_01575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_15
Methyltransf_25
Methyltransf_31
Methyltransf_11
MTS
TPMT
PrmA
TRM5-TYW2_MTfase
DUF3325
Motif
Other DBs
NCBI-ProteinID:
WPJ96390
LinkDB
All DBs
Position
complement(423649..424869)
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AA seq
406 aa
AA seq
DB search
MQEPKNFVSEPFNYHQEVEFTVDSLTNLGLGVGRVDGWVVMVPFVIPGERVKVRIFRNFQ
NYSDADLIEILEPSPDRIEPVCPLYTRCGGCQYQHMSYERQLKEKTQHVDELMQKLGGIE
FPVNLAHGSPKVYNYRSKITPHYNRPERDGSQPIGFLQYGRRNQIIDVEQCPIATDAINT
ALPEAREEARRAGGKKRRQRGGTLLMRDVLEGVVNDPQDIVSERVGNVTFQFKAGEFFQN
NPFILPELVDYVAEEASAEGARYLVDAYCGVGLFALSTAKSFEQVAGVEISEPAVRWAQA
NCKISNIKNARFVIGKAEAIFNGLKFPADETAMVIDPPRKGCDESFRQQLLQYRPQRLVY
VSCDPATQARDLKEFIEGGYKITRIQPFDLFPHTRHIENVVSLSLA
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgcaagagccaaaaaatttcgtatccgagccttttaattatcatcaagaggtggaattc
accgtggatagcctgaccaatctgggattgggagtcggccgtgtggatggttgggtggtg
atggtgcccttcgtgattccgggtgagcgggtcaaagtccgcatctttcgcaattttcaa
aattattccgacgctgatttaattgaaattttagagccttcgccggatcgcatcgagccc
gtgtgcccgctctacactcgttgcggaggctgccagtatcagcacatgagctacgagcgc
cagctcaaggaaaagacccaacacgttgatgaactgatgcaaaagcttggcggtatcgag
tttccggtgaatttagctcacggctcccccaaggtgtataattatcgctcgaagatcacg
ccacactacaatcgacctgagcgcgacggttcgcagccgatcggctttttacaatatggt
cgccgcaatcaaatcatcgatgtggagcaatgccccatcgcgaccgacgcgattaatacc
gcactccctgaagctcgcgaagaagcacgtcgcgctggtggcaaaaagcgtcgtcagcgt
gggggcactttgctcatgcgagacgtgctggaaggtgtggtcaatgatccgcaggatatc
gtctcggaacgtgtgggcaacgtgaccttccagttcaaggcaggtgaattttttcaaaat
aatccgtttattttgcctgaactggtcgactatgtcgccgaagaagcctcggccgagggg
gcgcgctatctagtcgacgcctactgtggagtcggtctctttgcgctctccacagccaaa
tctttcgaacaagtcgcaggggtcgagattagtgaacccgccgtccgatgggcgcaggcc
aactgtaagatcagcaatattaagaacgcccgctttgtcattggtaaggcagaagccatc
tttaatggtctcaaattccccgccgatgagaccgcgatggtgatcgatccaccgcgcaag
ggctgcgatgagagcttccgtcaacagctactgcaatatcgtccacagcgtctagtctat
gtttcctgcgatccagcgacacaggcacgtgacttgaaagagttcatcgaaggaggctac
aagatcacacgtatccagccatttgatttattcccccacacacgtcacattgaaaacgta
gtttcactcagcttagcctaa
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