Coraliomargarita algicola: SH580_01945
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Entry
SH580_01945 CDS
T10130
Name
(GenBank) carbohydrate ABC transporter permease
KO
K10119
raffinose/stachyose/melibiose transport system permease protein
Organism
calg Coraliomargarita algicola
Pathway
calg02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
calg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SH580_01945
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
calg02000
]
SH580_01945
Transporters [BR:
calg02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Raffinose/stachyose/melibiose transporter
SH580_01945
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Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
DUF2621
Motif
Other DBs
NCBI-ProteinID:
WPJ96463
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Position
complement(507344..508183)
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AA seq
279 aa
AA seq
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MTPKTQNKFSELIKLGYLAFVLVFAFFPLYVMVVVSFKSNEQFLANPWFFDSIASWNWNN
WAIGWDTVSGYICNSIFVSFLGTTITLCIVLMCSYALARYDFPGKNLIFYMVMATMFLPG
TVAALVTLFDLLRSMGLVNNLWALVLMASVGGQVAGVFILRNFIEDIPKELFESAQLDGA
GHLQQIRHIILPLSASIISVTCIMDFLGSWNNTILPLLLLRDDQLLTIPVGLFRLDGEYV
KQYGQLMAGYAISSVPLLIIFLFSMKFFVKGLSAGAVKG
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgactccaaaaactcagaataaatttagcgagttgatcaagcttggctatctcgccttc
gtactcgtgttcgccttctttccactgtatgtgatggttgtcgtgagctttaagagtaac
gaacagttcctcgcaaatccttggttttttgattctatcgcgagctggaattggaataat
tgggcgattggatgggataccgtcagcggttacatttgtaattcaatctttgtatctttc
ctcgggaccacgattacactttgtatcgttctcatgtgctcttatgcactcgctcgttat
gattttccgggcaaaaatcttattttctacatggtcatggcgactatgttcttgcctggc
actgtggctgcgctggtgacgctgttcgatttgttgcgcagtatgggcttggtgaataat
ctatgggcactggtgctgatggcttctgtgggggggcaggttgccggagtgtttattctg
cgaaattttatcgaagatatacctaaggagctttttgaatctgcacaattggatggcgcc
ggccacttgcagcagatccgacatattattttaccgctctctgcttcgattatatcggtg
acctgtattatggactttcttggttcctggaataacacgattcttcccttattgcttttg
cgcgatgatcaattgctgacaattcctgttggactgttccgtctcgatggagaatacgtg
aagcaatatggtcaattgatggcaggatatgccattagttcggtccctcttttaattatc
tttctgttctcgatgaaattcttcgtcaaaggtctctccgctggtgctgtgaaaggctag
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