Coraliomargarita algicola: SH580_03430
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Entry
SH580_03430 CDS
T10130
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
calg Coraliomargarita algicola
Brite
KEGG Orthology (KO) [BR:
calg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
calg03000
]
SH580_03430
Transcription factors [BR:
calg03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SH580_03430
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_31
HTH_3
I-HmuI_NUMOD-like
HTH_24
HTH_11
BRISC_FAM175B_helical
YdaS_toxin
Cro
HTH_Crp_2
MarR
HTH_AsnC-type
Xre-like-HTH
HTH_10
MarR_2
HTH_23
MRP-L20
Motif
Other DBs
NCBI-ProteinID:
WPJ96756
LinkDB
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Position
complement(905583..906593)
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AA seq
336 aa
AA seq
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MSISQTKLAQQLGVSRSAVSHVLNGREHMVGEETRERILAAIRESGYHKNALVRALKANR
TDIIGIIVPETSMSFFNSIIRGVEMEAQLNGLRCLLCQSYHEICTLEQHISALREYRVDG
LVIGPSSSNIDDRIFRTLQEHRVPFVLFDNPLENLKTAFVGTENVVAGRMAAEHLLELGH
RKIACIKGYMDSEPARGRLQGYLEAMDAAGIEVRPEWVLDGGFSFEDGVAAIDQLRSNQV
DFSAVVAASDHVAFGAINALVRHGLRVPQDVSVVGCGNLDLAGMFMPSLTTVDQDPLDVG
RQALRLLVGQIKKKKLSSKAITIQPKLVCRDSTAPL
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagtatttcgcagacaaagttagcacagcaattgggggtctctcgctctgctgtgagt
cacgttttaaacggtcgtgagcatatggtcggtgaagagacacgtgaacggattttggct
gcgatccgtgagagtggttatcataagaacgctttggttcgtgcgcttaaagcgaatcgt
acggacattattggaattatcgtgcccgaaacctcgatgtcattttttaatagtatcatc
cgaggtgtggagatggaggcgcaactgaatgggctgcgatgcttgctgtgtcaaagttac
catgagatttgcactctagaacagcatatcagtgcactgcgggaatatcgagtggatggt
ctggtcattggtcccagtagctccaacattgatgatcgcatctttcgcactttgcaggag
catcgagttccttttgttttatttgataatccactggaaaatttgaaaacagcgtttgtt
ggcacggagaatgtggtggctggacgaatggcggcggagcatttgttggaattgggccac
cgtaagattgcatgcatcaaaggctatatggatagcgagccggcccgtgggaggttgcag
gggtatttggaagcgatggatgctgcgggcattgaagtgcgacccgaatgggttctggat
ggaggctttagctttgaggatggagttgctgcaattgatcaattgcgatcgaatcaggtg
gatttttcggctgtagtcgcggcttccgaccatgttgcttttggtgcgatcaatgcactg
gtacgtcatggtttgcgtgtgcctcaggatgtctcggtagtcggctgcggtaatttggat
ctagcaggtatgtttatgccttcactgacaacggtcgatcaggatccgcttgacgtgggc
cgtcaagctctgcgtctgttagtcggacagattaagaagaagaaactttcttccaaggcg
attacgattcaaccaaagttggtctgtcgcgatagtacggcaccgctttga
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