Coraliomargarita algicola: SH580_04360
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Entry
SH580_04360 CDS
T10130
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
calg Coraliomargarita algicola
Pathway
calg00300
Lysine biosynthesis
calg00470
D-Amino acid metabolism
calg01100
Metabolic pathways
calg01110
Biosynthesis of secondary metabolites
calg01120
Microbial metabolism in diverse environments
calg01230
Biosynthesis of amino acids
Module
calg_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
calg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SH580_04360
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SH580_04360
Enzymes [BR:
calg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
SH580_04360
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
WPJ96939
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Position
complement(1136627..1137883)
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AA seq
418 aa
AA seq
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MVQKIQPRFLDYTSAHAVAQNFGTPVYVYDQKTLEANAAAVLAFPNAFGLTARYAMKASP
NAAILKIFAQAGLHIDASSGHEVLRAMAAGIAAEKISLSAQELPEDLGELLDAGIKLNAC
SLAQLERFGQLKPGGEVGIRINPGAGSGGNNRTNVGGPSSSFGIWYEWIPQIKELLAKYS
LTAVRIHTHIGSGSDPEVWLKVSKMNFEMVRQFPDVVTLNLGGGFKVGRMPDEKSTDLQV
VGQPIKEKFEEFAAETGRQIRLEVEPGTFLVGNACALLSKVQDVVSTGEQGYDFIKLNTG
MTELLRPSIYGAQHPISLLQSEEAASSKEYVVVGHCCESGDILTPAPGDPELLATRNLPV
AQIGDYCVIDGSGAYASAMTPKHYNSYPEAAEVMLDQEGTAKLIRRRQKLEDIWANEV
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagaaaatacagccacgctttctagattacacgagcgctcatgcagtcgcccaa
aacttcggcacgcccgtatatgtctacgatcaaaagacattggaggccaatgcagccgct
gtgcttgcttttcccaatgccttcggtttgacggctcgttacgcgatgaaggcttcgccg
aatgcggcgatcttgaagatttttgcccaagcggggctgcatattgatgcgtcgtcgggg
catgaggtactccgtgcgatggcggcgggcattgccgcagagaaaatcagtctgagtgcg
caagagttgccagaggatttgggcgagctcttagacgcaggaataaagctgaacgcgtgc
tcgctcgctcaattggaacgtttcggtcaactcaagcccggtggtgaagtcggtattcgc
atcaaccccggcgctggctcgggcggtaataatcgcaccaatgtgggggggccgtcttct
agctttggtatttggtacgagtggattcctcagatcaaagagctattggctaaatattcg
ctcaccgcggtgcgcatccacacccatattggctcgggcagcgatcccgaggtttggctc
aaggtgtcgaagatgaattttgagatggtgcgtcaatttcccgatgtggtgacgctcaat
ctcggaggtggcttcaaagtggggcgcatgccggatgagaagtcgacggacttgcaagtg
gtggggcagccgatcaaggaaaagtttgaggagttcgccgccgagaccgggcgtcagatt
cgcctcgaagtcgagcctggcaccttcttggtcgggaatgcctgtgccttactgtccaag
gtgcaagatgtcgtctctaccggcgagcagggctatgattttatcaagctcaacactggc
atgacggaattgctgcgtccgtctatttacggagcgcaacacccgatcagtctcttgcag
agtgaagaagccgccagctctaaagaatacgtggtggtggggcactgctgtgaatccgga
gatattttgacacctgcgccgggcgacccggagcttctggccacccgcaatttacccgtg
gctcagatcggtgactactgtgtgatcgatggctcgggagcctatgcctcggcaatgaca
cccaagcactacaattcgtatcccgaagctgcggaagtgatgctcgatcaggagggcacg
gcaaagttaatccgtcgccggcagaagttagaagatatttgggccaacgaagtgtag
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