Coraliomargarita algicola: SH580_06815
Help
Entry
SH580_06815 CDS
T10130
Name
(GenBank) alpha-amylase family glycosyl hydrolase
Organism
calg Coraliomargarita algicola
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WPJ97420
LinkDB
All DBs
Position
1775120..1783468
Genome browser
AA seq
2782 aa
AA seq
DB search
MLLSLKPLTATLRLTALLLITLSVRTTLGEAMLQYFNTDWAEITRKMPELAEAGYSSLWL
PPPTKGSGGLSVGYDLWDPFDLGSKNQRNTVRTRYGTEAELLELVKTAHRFGIRVYFDNI
MNHRAFDIPGYNEDTPIDVYPGMVPEDFHLQTTQEGFYRKWNNTRDWNSAWQVQNLGLAD
LIDIAQEPGTTNYNFGPTEGSTFPKIKFIRDPDRPEQYAYDKDDNYIGFGGLLPLAEGLL
NTEGNPTPSEAQIKARAQQYLQDNAGYYEEYVQDYLNRAARWLMDRTHADGLRLDAVKHA
QADFFGATFGEDKDSSNYGYLGQVQVQYNLTRGFSDWNNHRDTVFDTEAPRDDAMVFGEH
LGEPPGYSDYFSAGMRLVDNPLRTEFNSRLGSPWNGLNGFDNSGAGGFDPALTVMHAQSH
DNDYASRRELQHAMYFTRAGLGLLYTDGNYQAETLGESGGAFPRHANTSFLGQWDDSRVP
NILYIHEQFARGYQLGKYSDSDVVVYERMDKRENGSMSDADGVTMLFMLNDDYSSGHGVN
FGTSFPATPGGNDAYLYNYSSYYGGPFYTYASNIVNGSTIVPAGGYFVFGWKNPDPSSLW
ANSGGRPLTIYQGGVEVGTVDVLRKDGPNGDADFHGDTLPSSSQPIISNLENNDFAYTAT
VPRITDGTQVRFVARVDGSAENILLKLDGGIDLNDTNHAGGDPRDNPPALATDTFLGYEQ
ATFVDRIGPEKFAATDTARCIFGSAGAETFTAGAATANGFGDNPQETAAATFVFHDPTAG
FDSWTPDDGALATATQLDQTGSSTIIWVKTNSVGAGFKAYVYYTTDGSAPEGAGAWGRGT
TQVAEAFYVVPNTEDGDNWWRAEINPTPAGTLKYKISVYKTFQPSVFPSGAAEVALKTKM
MTTFQTSERDLTTVTVRPHNDYGVSETGLEEGMHMIAARTFLDRPGKASIYNTFKQTFYY
DAERPQGEVRFPENNGDTIGGSSYGIVVRTDATVKEVWYRIEDSDTTNDDINTGGSNGNG
VGFEPFTDTNQNGTRDAGESYDDLNGNEQWDNNVAEIWALASEQTPSLNITPGDPAYRKE
WRFNYVNVPATGSADIKVRFRELSSSNYEDFALSDEAGHFTTLTRTVNTAGPDERMFIAF
PAQNRQIVDDNYVMKVYFTKSLADGLTEQQLIDRFLINIGSTEENDAGESQSRDDYSIVY
NETSEYHALAYQLPNLYNDINDYDHKITVTHDRPTPATDFESTRIVRALPVTTPRVLIVN
PPELGSDSRPYEIILPDVPAPTADQREFTIQIATNLDATNVALNFVDLKGSSIGTPTSVV
SGNSKLWDFTWSAIAEGSYRFTATVTAPGGTGTADRNTKVIFRELVEEDPNNTDDDNDGL
LDADENTAQLLPIVNSDQWTNGDIHAYFAFGSSNPFSPDTDGDGLPDGLEVGWRNALNAD
TDAAADTDGDGFKNFIGDLDPPFYNTVDNYGNVPNVDSISAGGDRTRQSAGSVTDPTNPD
SDYDGISDGVEDANRNGWVDGDGAIIPVDYNPWAGRDWPDGVRQPSETWTETDPNNADTD
GDGASDGYGEDSNFDGVIAGDSNNDRVYDAGEAWSETDPLNRDTDGDGLPDGWEINNGLD
PLDNGTDSLRTAAVDDGDTNQGATGDPDGDSFSNATELVNGTRPLEDDNVPPPPANSIII
GPGADDSVGSVSNLNEFTDWTIDDLLALDEYDGNGGNNQGSDIYKAYDGFDESRDIVAFY
FRDGGADGKLYFRFDFQDLKAFAEEGNLDAYIVIDTGNTAVGESALPEEVDTRTNMKWEA
VVAIYNADNGAVYIDTDSGSNTTAIGEDLFSKGVVRRTQADANGFKQAYFNSQLDAMEAS
ISRQALLDAGWNGNADNLNFQVYTTRDGIDNSGPGLGDIGGRSDVRDSIRNDYIASSYYK
DQSNLSGDKSILYSWFSRTGDNDRGKRAKVALITHGNQAIRSANEMHDRIHDDASTDPAG
YFRLVDAHDAFAAAVNLHITPTLASALQWAAVDPSIGKAYRDGPTLNARISSLLLSGEAM
LFGTTFADQVVPFATTAFTQDSVNLSNTVLTEIYSAAPSSTTFWPAERVVDDGVLATIQS
MGYSHTVVDQMRHFFKWFGRTQTLGQAGYQINEVNNVGLFPIHDFASTFLFQNQDLGLNI
SLRELLGRRARSGTQDQVLSLLSDWEDFRSAANAEAYDLNLRWIANRPWIELVTLDDVAH
GDIDLSQPADGSGDTWSTVDRGTGQSLQRTAKDFIDHATQENYGNWYNGQSGREEGLAGK
TFEVRPGVNVPAAFGEVGVSGIADDAWGDVAAISNSSTSQLGRSVAHAAMFVTAFHEQQN
NNLSKFSTGTYIYPDTDFNNLAEFSKLAQSQLRFAALYQRVDAWAAAAPVIAQTSAEDID
LDGEDEYLLYNETAFAVFEAIGGRCVAAFARNPASGTVYQIIGTQPSYAGNETEEEGTAN
VDGSSIGARRTSAFKDWYADGSGGGTTQYVNSLYTVAASGSNGWTFTAPGSHIIKTITLD
DVLPDLQANYTLSGTNVDKLYVRHGLSPNLWNLISRGQYDLDNLSVSTGRIRLANRGGAE
PVVAEVTYDANTVFNGDAVDDQPGTLEWDSPNMRNQALTQQVEFTNVDGQNSFSMTLSLE
SGMTDNDGDDLPNWWELDNGLDPDDATGSNGKTGNDDGDAFTNFEEYVLGLDLTEAEFNG
LPQGLIETNESGHFTVTFPVLAGRSYRVWYVDDLTQTWQPAGGRFSITEDAPAYTWTDDG
SATTPDPATVDNRFFKIEITRP
NT seq
8349 nt
NT seq
+upstream
nt +downstream
nt
atgcttttatccctaaaaccgctcacagccacactacggctgactgccctgctactcata
actctaagcgtccgcacgaccctaggcgaggccatgctccagtatttcaacacggactgg
gcagagatcacccgcaagatgccggagctggccgaagcgggctactcctcgctgtggctg
ccgccccccactaaaggctcgggcggtctttccgtcggctacgacctgtgggaccccttc
gacctgggcagcaagaaccagcgcaacaccgtgcgtactcgctacggcacagaagcggag
ttgctggagctggtcaaaaccgctcaccgttttggcatccgggtctattttgataacatc
atgaaccaccgggcctttgacatcccgggctacaatgaagacaccccgatcgacgtctac
cctggcatggtgccggaagatttccacctacagaccacccaggagggcttttaccgcaag
tggaacaacacccgcgactggaacagcgcctggcaggtgcaaaacctcggcctcgccgat
ttgatcgacatcgcccaggagcccggcaccaccaactacaattttggccccaccgaaggc
agcacttttccgaagatcaaattcatccgcgaccccgatcgccccgagcaatacgcttac
gataaagacgacaactacatcggcttcggcggcctgctcccgctcgccgaaggcctgtta
aacactgagggcaaccccactcccagcgaggcccaaatcaaagcccgagcacagcaatac
ctacaagacaacgccggctactacgaagagtatgtgcaagactacctcaaccgcgcggct
cgttggctaatggatcgcacccatgcggacggcctgcgcctcgacgcggtgaaacacgcg
caggcggatttcttcggcgcgacctttggcgaggacaaagactccagcaactacggctac
ctgggccaagtgcaggtgcagtataatctcacccgcggcttctccgattggaacaaccac
cgcgacaccgtcttcgacactgaagcgccccgcgacgatgccatggtctttggcgaacac
ctcggcgagcctccaggctatagcgactacttcagtgcgggtatgcgactggtcgacaat
cccctccgcacggaattcaacagtcgtctcggtagcccttggaatggtctcaatggtttc
gataactccggcgcaggcggcttcgaccccgcactcacagtcatgcacgcgcagagtcac
gacaacgactacgcctcccgccgcgagctgcaacacgccatgtatttcacccgcgccgga
ctcggcctgctctacactgatggcaactaccaagccgaaaccctcggcgaatccggcggc
gccttccctcgtcacgccaacacctccttcctcggccaatgggatgactctcgcgtgccc
aacatcctctacatccacgagcaattcgcccgtggctaccaactcggcaaatactccgac
agcgatgtcgttgtttacgagcgcatggataaacgcgaaaacggcagcatgagcgatgcc
gacggcgtcaccatgctctttatgctcaacgacgattactcgtcaggccacggcgtcaat
ttcggcaccagttttcccgctacccccggcggcaacgatgcttacctgtataactactcc
agctactacggcggccctttctacacttacgcgtccaacatcgtgaatggctccaccatc
gtccccgccggcggctacttcgtatttggttggaaaaaccccgatccttctagcctgtgg
gccaactccggcggccgcccgctcaccatctatcaaggcggcgtcgaagtcggcaccgtt
gatgtgctgcgcaaagacggccccaacggcgatgccgatttccacggcgacacactgccg
agttccagccaaccaatcatcagcaatctcgaaaacaacgacttcgcctacaccgccacc
gtgccccgcatcaccgacggcacacaggtgcgcttcgtcgctcgcgttgatggctccgcc
gaaaacatcctgctcaaactcgacggcggcatcgacctcaacgacaccaaccacgccggc
ggcgacccgcgcgacaatcctcccgcactcgcgaccgacaccttcctcggctacgaacaa
gccacttttgtcgaccgcatcggccccgaaaaattcgccgccacggacaccgcacgttgc
atcttcggctctgctggcgcggagaccttcaccgcgggcgcagcaaccgcaaacggcttt
ggcgacaacccacaagagacggccgccgcgaccttcgtctttcacgatcccacggccgga
ttcgacagttggacaccggacgacggcgcgctcgccacagccacccagctcgaccagacc
ggcagctccaccatcatttgggtaaagaccaacagcgtcggcgcaggcttcaaagcttac
gtttattacaccaccgatggcagtgcccccgaaggcgcgggcgcatggggccgcggcacc
actcaagtcgccgaagccttctacgtcgtgcccaacaccgaggacggcgacaactggtgg
cgcgccgaaatcaaccccactcccgcgggcactttaaaatataagatcagtgtttataaa
acattccagccgagcgtgttccccagcggcgcggccgaagtcgccctcaagacgaagatg
atgaccaccttccaaacctccgagcgcgacctcaccaccgtcaccgtgcgtccacacaac
gactacggcgtcagcgaaaccggcctcgaagaaggcatgcacatgatcgccgcacgcacc
ttcctcgatcgccccggcaaagcctccatttacaacaccttcaagcaaaccttctactac
gatgccgaacgcccacaaggcgaagtgcgcttccctgaaaacaacggcgacaccatcggc
ggctccagttacggtatcgtcgtccgcaccgatgccaccgtcaaagaagtttggtatcgt
atcgaagattcggatacgaccaacgacgacatcaacaccggcggcagtaatggcaacggc
gtcggcttcgagcccttcaccgacaccaatcaaaacggcacccgcgacgctggcgaaagc
tacgacgacctcaacggcaacgaacagtgggataacaacgtcgccgaaatctgggcgctc
gcctccgagcaaacacccagcctcaacatcacccccggcgatcctgcctatcgtaaagag
tggcgcttcaactacgtcaacgtacccgccaccggcagcgccgacatcaaagtgcgcttc
cgcgaactctcctctagcaattacgaagactttgcgctcagcgacgaagctggccacttc
accacactcacacgcaccgtcaacaccgccggccccgacgaacgtatgttcatcgccttc
cccgcgcagaatcgccagatcgtagacgataactacgtgatgaaggtttacttcaccaaa
tcactggccgatggcttaaccgaacagcaactcatcgatcgcttcttgattaacatcggc
tcgaccgaagagaacgacgccggtgaatcacaaagccgcgacgactactcgatcgtttat
aacgagaccagcgaataccacgcgctggcctatcaattgcccaatctctataacgacatc
aacgactacgatcacaagatcaccgtcacccacgaccgccccacgcccgccaccgacttc
gagtcgacccgcatcgtgcgcgcgctccccgtcaccacgccacgcgtgctgatcgtcaac
ccaccggaactcggctcagacagccgcccttacgaaatcatcctgcccgacgtgcccgcc
cccactgccgaccagcgcgagtttaccatacaaatcgccaccaatctggatgcgaccaac
gtggcactcaacttcgtcgatttgaaaggctccagcatcggcacaccgaccagcgtagtc
tcgggcaacagcaaactctgggacttcacctggtccgccatcgccgagggcagctaccgc
ttcaccgccaccgtcaccgctccaggtggcaccggcaccgccgatcgcaacaccaaggtc
atcttccgcgagctggtcgaggaagaccccaacaacaccgacgatgataacgacggcctg
ctcgatgccgatgaaaacaccgctcagctcttgcccatcgtcaattcggatcaatggacc
aacggcgacattcacgcttatttcgcattcggcagttccaatcccttctcgcccgacacc
gacggcgacggcctgcccgacgggctcgaagtcggctggcgcaatgccctcaacgccgac
accgacgcagccgccgacaccgacggtgacggcttcaaaaactttatcggcgacctcgac
ccgcccttttacaacacggtcgacaactatggcaatgtgcccaacgtcgacagcatcagc
gcaggcggcgaccgcacacgccagtccgccggcagtgtcaccgatcccaccaatcccgac
tccgattacgacggcatttccgacggggtcgaagacgccaaccgcaacggctgggtcgat
ggcgatggtgccatcatccccgtcgactataatccatgggcaggacgcgactggccagac
ggcgtcagacagcccagcgaaacctggaccgaaaccgatcccaacaacgccgacacggac
ggcgatggtgccagcgacggctatggcgaagacagcaacttcgatggcgtcatcgcaggc
gacagcaacaatgatcgcgtctacgatgcaggtgaagcatggtccgaaaccgatcctctc
aatcgcgacaccgacggtgacggactccccgatggctgggaaatcaacaacggcctcgac
ccgctcgataacggcaccgattcactgcgcaccgccgcagtcgacgatggcgacaccaac
caaggcgccaccggcgaccccgatggcgacagcttcagcaatgccaccgaattggtgaac
ggcacacgcccgctggaagacgataacgtgccaccgccccccgccaactcgatcatcatc
ggccccggcgcagacgactccgtcggtagcgtgagcaacctcaacgaattcaccgattgg
accatcgacgacctgctcgctctcgacgaatacgatggcaacggcggcaacaaccagggc
tccgatatctataaagcctacgacggcttcgatgaatcacgcgacatcgtggccttctac
ttccgcgacggcggagcggacggcaaactctacttccgattcgacttccaagacctcaaa
gcctttgcagaggaaggcaatctcgatgcctacatcgtcatcgacaccggcaacacagcc
gtcggcgagtccgccctacccgaagaagtcgacactcgcaccaacatgaaatgggaggcc
gtcgtcgcgatctacaatgccgacaacggcgccgtttacatcgacaccgactccggcagc
aacaccaccgccatcggcgaggacctcttcagcaagggcgtcgtgcgccgcacccaagcc
gatgccaacggtttcaaacaagcctacttcaattcccaattggacgcgatggaagcctct
atcagtcgccaagccttgctcgacgcaggttggaatggcaatgccgacaacctaaacttc
caagtctacaccacccgcgacggcatcgacaactcaggccctggcctcggtgatatcggt
ggccgcagcgacgtgcgcgactccatccgcaacgactacatcgcgtcttcttattataaa
gatcaaagcaatctcagcggcgacaagagcatcctctacagttggttcagccgcacaggc
gacaacgaccgtggcaaacgcgccaaggtcgcgctcatcacacatggcaatcaagccatc
cgctccgccaacgaaatgcacgaccgcatccacgacgatgccagcaccgatcccgcgggc
tacttccgcttagtcgatgcgcacgatgcctttgctgccgcggtcaatttgcacatcaca
ccaaccctcgcctcggcactgcaatgggccgccgtcgatccaagcatcggcaaagcttac
cgcgacggcccgacgctcaacgcgcgcattagcagcctccttctctcgggagaagccatg
ctctttggcaccacctttgccgaccaagtcgtgcccttcgccaccaccgcattcacgcag
gacagtgtcaacttatccaacaccgtgctcaccgagatctacagcgcagcgccttccagc
acaaccttctggcccgccgagcgcgtggtcgacgacggcgtgctcgccaccatccaatca
atgggctacagccacactgtggtggatcaaatgcgccacttcttcaaatggtttggccgc
acgcaaactctcggacaagcgggctaccagatcaacgaagtcaacaacgtcggcctcttc
ccaatccacgacttcgccagcaccttccttttccaaaaccaggatctcgggctcaacatc
tccctgcgcgaactactcggtcgtcgcgcccgcagcggcacccaagatcaagtgctcagc
ctgctcagcgattgggaagacttccgtagcgccgccaacgccgaggcctacgatctgaac
ctgcgctggatcgccaaccgcccgtggatcgaactcgtcacactcgacgatgtcgcgcac
ggcgatatcgacctctcgcagccggccgatggcagcggcgacacatggagcaccgtcgac
cgcggcaccggccaaagcctgcaacgcaccgctaaggactttatcgaccacgccacccaa
gagaactacggcaactggtataatggccagtccggccgcgaagaaggtctcgcgggtaag
acctttgaagtgcgcccgggcgtgaacgtgcccgccgccttcggcgaagtaggcgtcagc
ggtatcgccgacgatgcctggggcgacgtcgccgccatcagcaacagcagcaccagccaa
ttgggccgctccgtcgcgcacgcggccatgtttgtgactgccttccatgagcagcagaac
aataaccttagcaagttctccaccggcacttacatctatcccgacaccgacttcaacaac
ctggccgagttctccaaactggcacagtcgcagttgcgctttgccgccctctaccaacga
gtcgatgcctgggccgccgccgcacccgtcatcgcacaaaccagcgctgaagacatcgac
ctcgacggcgaagatgaatacctgctctacaacgaaaccgccttcgccgtcttcgaagcc
atcggcggacgctgcgtggccgcctttgcgcgcaaccccgccagcggcaccgtctatcaa
atcatcggcactcagccaagctacgccggcaacgaaaccgaagaagaaggcaccgccaat
gtggacggcagcagcatcggcgcacgccgcacctccgcgtttaaggactggtatgccgac
ggctccggcgggggcaccacccaatacgtgaacagcctctacactgtcgccgccagtggc
agcaatggttggacgtttaccgcgcccggtagccacatcataaagaccatcacgctcgac
gacgtgctccccgacctgcaagccaactacaccctcagcggcaccaatgtcgacaagctc
tacgtgcgtcacggtctctcgcccaatctctggaacctgatcagccgcggtcaatacgac
ctcgacaatctcagcgtatccaccggccggatacgcctcgccaaccgtggcggtgccgag
cccgtcgtcgctgaagtcacctacgatgccaacacagtcttcaacggcgacgcggtcgac
gaccaacccggcaccctcgaatgggattcgcccaacatgcgcaaccaagcactgacgcaa
caagtcgagttcaccaacgtcgacggtcagaacagcttttcgatgaccttgagcctcgaa
agcggcatgacggataacgacggcgacgacctgcccaactggtgggagctggacaacggc
ctcgatcccgacgacgccactggcagcaacggaaaaaccggcaacgacgacggcgacgcc
ttcaccaacttcgaagaatacgtgctcgggctcgacctcacagaggcggagttcaacggt
ctaccgcagggcctgattgaaacaaacgagagcggccacttcactgtgaccttccccgtt
ctcgcgggccgcagctaccgcgtctggtatgtcgatgatttgacacaaacttggcaaccc
gccggcggccgcttctccatcaccgaggacgcccccgcctacacatggaccgacgacggc
tccgccaccactcccgatcccgcgacagtcgacaatcgtttcttcaagatcgagatcacc
cgaccttag
DBGET
integrated database retrieval system
