Coraliomargarita algicola: SH580_07635
Help
Entry
SH580_07635 CDS
T10130
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
calg Coraliomargarita algicola
Brite
KEGG Orthology (KO) [BR:
calg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
calg03029
]
SH580_07635 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
calg02000
]
SH580_07635 (bamA)
Mitochondrial biogenesis [BR:
calg03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
SH580_07635 (bamA)
Transporters [BR:
calg02000
]
Other transporters
Pores ion channels [TC:
1
]
SH580_07635 (bamA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POTRA
Omp85
POTRA_2
Motif
Other DBs
NCBI-ProteinID:
WPJ97579
LinkDB
All DBs
Position
complement(1977544..1979916)
Genome browser
AA seq
790 aa
AA seq
DB search
MRIIQTLLLAVTSLLVLGFPFNTSVAQEAETYPVINRIVTEFDGFRSVSDQYIFGNIQLR
PGMNYNPALLDQSIRTLYSTGHFEFVEVRVDKAQDQKVDLVFELVSKYTIERIRFSGNEA
YSDSRLASKTEIESGMPLDEYGISVGADAIAEYYVEKGYPDVEVDYRIQRDETTGYAVVN
YDIDEGGKVRIEEINFVGNDAISSKTLRKQLDTRKHNWLSWLLGSGKFDEKKFKEDLKIL
RKYYRDSGYLDCEINEDQVEIDFIESDEIVITIPVVEGQLYYLGEFSVEGATIYTSAELL
NSVRLETNSPFSPQEVDDAATAIREYYTSNGYLETRVRAERVPNMETRQIDVVFRVSESE
KFYVESIKIEGNTKSKARVIVRELALSPGDVFDRKRMEVSQRRLENTSFFEDVRLNPEPT
NVPGRKDLGITVREGRTGNFTFGAGFGSVESAVVYFEMSQGNFDLFNWRDGFQGDGQKFR
FRASLGTSSNQILIAFEEPWLFEQRLAFGVELYRTESDYNSSDYNELRTGFELYLRRRLF
ELVEARLSYRLELVEIFDVDRGTGVDNGDGSITGDGIADVFQRAEGEELVSKVGLTFLRD
TRETLIFTRKGNRSSLSFEYAGVGGDVNYYKFEGRTAHFIPTFDTMKQSLSILARVGSVT
PFGQSEIVPFYDRFYLGGPDTLRGFDYREVGPRDPDDEDESVGGNSYSMISFEYAFRVAE
PLGLVVFYDWGFVNTDDLDFSMSDYADNWGIGARIMLMGSPLKLDLGIPITSPEGAGGGT
QFNFSFGTRF
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatcattcagactcttctccttgctgtcactagcttgctcgtgctcggttttccg
tttaatacttcggtggctcaggaggccgaaacgtatccggtcatcaaccgcattgtgact
gagttcgacggctttcgttcggtcagcgatcagtatatctttggcaatattcagttgcgt
ccggggatgaattacaatccggcgctgttggatcaatccattcgcacgctgtatagcacg
gggcacttcgagtttgtggaagtgcgtgtggataaggcgcaagatcagaaagtcgattta
gtctttgaattggtttccaaatacaccatcgagcgcatccggttttccgggaatgaggct
tattccgattcccgcttggcttctaagaccgaaatcgagagtggcatgccgctggatgag
tatggcatcagtgtgggtgcagacgcgattgccgagtattacgtcgagaagggctatcca
gatgtcgaggtcgattaccgaattcagcgcgatgagacaaccggctatgcggtggtcaat
tacgacatcgatgagggggggaaggtgcgtatcgaggagattaactttgtggggaatgat
gcgatcagctccaagacgcttcgtaagcaactcgatacacggaagcataattggctttca
tggttgctcggttcggggaagttcgacgaaaagaaattcaaagaagacctcaaaattctg
cgtaaatactatcgtgattccggttatctcgattgtgagatcaacgaagatcaggttgaa
atcgattttatcgagtccgatgagatcgtgattacgattccggtggtcgaagggcagctt
tactacctgggggagttctcggtcgaaggtgcgacgatctacacctctgcggaattattg
aattcggtgcgattagagacgaatagtccattttctccacaagaagtggatgacgcggca
accgcgattcgtgaatactacacctccaatggctatttggagacacgggtgcgcgctgag
cgggtgccaaacatggagactcgccagattgacgtggtcttccgtgtcagtgaaagcgaa
aaattttacgtagagtcgattaagatcgagggcaataccaagtccaaagcgcgggtgatc
gtgcgcgaattagcgctaagccctggggatgtgtttgaccgcaagcgcatggaggtgagc
cagcgtcgtttggaaaataccagtttcttcgaagatgtgcgcctgaaccccgagcccaca
aatgtgccagggcgtaaagatttgggcattactgttcgtgaaggtcgtacaggtaacttt
acttttggtgctggtttcggctcggtggaaagtgcagtggtctactttgaaatgtcgcag
ggtaacttcgacctctttaattggcgcgatggatttcaaggggatgggcagaagttccgc
ttccgtgcctcgctcggtaccagcagtaatcagatcttgatcgcctttgaggagccttgg
ctctttgagcagcgccttgcattcggcgtggagctctaccgcacagagtccgattataat
agctccgattataatgaacttcgcacaggcttcgagctctacttgcgtcgccgcctgttc
gagctggttgaagcgcgtctttcctaccgcctagaactggtcgagattttcgatgtggat
cgtggcactggcgttgataatggggacggctctattacgggtgacggtattgcagacgtg
tttcagcgtgctgaaggtgaggagcttgtttccaaggtcgggctcacattcttacgtgat
acacgcgagactttgatttttacgcgcaagggcaatcgctctagcttgagtttcgagtac
gcgggcgtggggggcgatgtaaactactacaagtttgaggggcgcacggctcactttatc
ccgaccttcgatacgatgaagcagtccttatcgattcttgcccgggtcggcagcgtgacg
ccatttggtcaaagcgagatcgttcctttttatgaccgtttctatctcggtggaccggac
acactccgtggatttgattaccgcgaagtgggcccgcgtgacccggatgacgaagatgaa
tcggtggggggtaactcgtattccatgatttcttttgaatatgctttccgagttgcggaa
cctttagggctagtcgtgttctatgactggggatttgttaatacagatgatttggatttc
agcatgtcagactacgccgataactgggggattggtgcgcgcattatgcttatgggctca
ccgctcaagctggatctcggtattcccattacatcccccgagggtgctggtggtggcaca
cagtttaatttttcctttggcacacgcttctag
DBGET
integrated database retrieval system
