Coraliomargarita algicola: SH580_08125
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Entry
SH580_08125 CDS
T10130
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
calg Coraliomargarita algicola
Pathway
calg03030
DNA replication
calg03410
Base excision repair
calg03420
Nucleotide excision repair
calg03440
Homologous recombination
Brite
Enzymes [BR:
calg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SH580_08125 (polA)
DNA replication proteins [BR:
calg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SH580_08125 (polA)
DNA repair and recombination proteins [BR:
calg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SH580_08125 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SH580_08125 (polA)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WPJ97675
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Position
2081059..2083878
Genome browser
AA seq
939 aa
AA seq
DB search
MKSLYLLDGMALAYRAHFALIRSPIYTSKGFNTSAIFGFTATLIDLITKQKPSHLAVVFD
TSAPTERHILHPEYKAQREAMPEDLAAALPHLSRIAEAFGIPVLKMDGYEADDIIGTLAH
RAEADGFDEIYMVTPDKDFGQLVTDKIKMYRPGRKGDGGEILGVEEIKEKWGITRVDQVI
DMLGLCGDVSDNIPGVPGIGPKTAEKLLAKYDTVEGLLDHVDELKGKQQEKVRDNADQAR
LSKKLATIQLDVPINSDWDAIQLEAPDQEKLIPIFAEFEFRTLGKRIFGADFSVQAAATD
LVLMSEDDEKAAKQDPGSQISAFAASESADPQLALIPEIAFKKFGDLKTDYRIVKTDAEL
AELVASLTAAKAFAFDTETTGLNPRAAQLVGMSFSTQPHSGYWVPASEAALAALRPVFAD
ATLTKIGHNLKFDLSILEENNLPVAGPCHDTMLAHALIDPEQRHNLDTLSEDFLQYSPIR
FSELLPDAKKGESIDYSGVAEKDLAHYAIEDADIALQLWQTFEPKLKESGQAKVFYDIEV
PLLPVLVTMEREGIRMCEDTLAATGASLESHIAQLQADIYQVAGHEFNLNSPKQLGEVLF
NELKLVEKPKKTKTGQFATNEQVLSSLAPKHPIVADLLEYRQLTKLKSTYIDALPHSVDA
KTGRVHTHYGQVQTATGRLSSNDPNLQNIPVRSPKGREIRQAFVPREGWKLLAADYSQIE
LRILAALTSDAGLLKAFKEGQDIHTATAAKIFGVTPEDVTRDQRSTAKMVNFGIPYGISA
FGLAQRLGTVSRKEAQEIIDNYFAQFPGIPGYMEAQKESAQKKGYVETKCGRRRHLRDIN
SGNGTIRAAAERNAINMPIQGTAADMIKIAMVRIQNAIQEAGLKSRMLLQVHDELVFDLE
PSEEAQLREIVSDGMVGALELACPIEIEIGLGDNWLEAH
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctctttacctactcgacggcatggcgctggcctatcgcgcgcactttgccctg
attcgcagccccatttacaccagcaaaggcttcaacacctcggccatctttggcttcacc
gccaccttgatcgatctgatcaccaagcaaaagccgagtcacttggctgtggtcttcgac
acctccgcgcccaccgaacgccacattctacaccccgagtataaggcgcaacgcgaagcc
atgccagaagacctggccgccgcactgccccacctctcccgcatcgccgaagccttcggc
attcccgtgctcaaaatggatggctacgaggccgacgacattatcggcaccctcgcccac
cgcgcggaagccgacggcttcgacgaaatttacatggtcacccccgacaaggactttggc
caactagtcaccgacaagatcaaaatgtatcgccccggccgcaaaggcgacggcggcgaa
atcctcggcgtcgaggagatcaaagaaaaatggggcatcacccgcgtcgaccaagtcatc
gacatgctcggcctctgtggcgacgtctccgacaacattcccggcgtgcccggcatcggc
cccaagaccgccgaaaaactactggccaaatacgacactgtcgaaggcctgctcgaccac
gtcgatgagctcaaaggcaaacaacaggaaaaagtccgcgacaacgccgaccaagcccgc
ctctccaaaaagctcgccaccattcaactcgatgttcccatcaactccgactgggacgcc
atccagctggaagcgcccgaccaggaaaagctgatcccgatctttgccgaattcgaattc
cgcaccctcggcaaacgcatcttcggtgccgacttctccgtgcaagccgccgccaccgac
ctcgtgcttatgagcgaggacgacgagaaagccgccaagcaagacccgggatcgcaaatc
tccgcatttgctgcgtccgagtcagccgacccacaactggccctcattcccgagatcgcc
ttcaaaaagttcggcgacctcaagaccgactaccgcatcgtcaaaaccgatgccgaacta
gctgagctcgtcgccagcctcacagcagccaaagcatttgccttcgacaccgagaccacc
gggctcaatccccgcgccgcgcaactcgtcggcatgtctttctccacccagccacacagc
ggctactgggtgcccgccagcgaagccgccctagccgcgctgcgcccggtcttcgccgac
gccacactcaccaaaatcggtcacaacctcaaattcgacctgtccatcttagaggaaaac
aacctccccgtcgccggtccctgccacgacaccatgctggcccacgcactgatcgaccct
gaacagcgccacaacctcgacacgctctccgaggactttctccaatattccccgatccga
ttcagcgagctactgcccgacgccaaaaaaggcgagtcaatcgactactccggcgtcgcc
gaaaaggacctcgcccactacgcgatcgaagatgccgacatcgcgctgcaactctggcag
accttcgagcccaagctcaaagaaagcggccaggccaaagtcttttacgacatcgaagtg
cccctactgcccgtgctcgtcaccatggagcgcgaaggcatccgcatgtgcgaagacaca
ctcgctgccaccggtgcctcactcgaaagccacatcgcgcaactacaagccgacatctac
caagtcgccggccacgagttcaacctcaactctcccaagcaactcggcgaagttttgttc
aacgaactcaaactcgtcgaaaaacccaagaagaccaagaccggccagtttgccaccaac
gagcaagtgctctccagcctcgcgcccaagcacccgatcgtcgccgacctactcgaatac
cgccagctcaccaaactcaagagcacctacatcgacgccctgccacacagcgtcgacgcc
aagaccggacgcgtgcacacccactacggccaagtgcaaaccgccaccggccgcctctcc
tccaacgatcccaacctgcaaaacatccccgtgcgcagccccaaaggccgcgagatccgc
caggcctttgtgccgcgcgaaggttggaaactcctcgccgccgactactcccagatcgag
ctacgcatcctcgccgccctcaccagcgacgccggcctactcaaagccttcaaagaaggg
caagacatccacaccgccaccgccgccaagatctttggcgtcacccccgaagacgtcacc
cgcgaccagcgcagcaccgccaaaatggtcaacttcggcatcccctacggcatctccgcc
ttcggcctagcccagcgcctcggcaccgtcagccgcaaagaagcccaagaaataatcgac
aattacttcgcccaattccccggcatccccggctacatggaagcacaaaaagaaagcgcc
caaaagaaaggctacgtcgaaaccaagtgcggacgccgccgacacctacgcgacatcaac
tccggcaatggcaccatccgcgccgccgccgagcgcaacgccatcaacatgcccatccaa
ggcaccgccgccgacatgataaagatcgccatggtgcgcattcaaaacgccatccaagaa
gccggcctcaaaagtcgcatgctacttcaagtgcacgacgaactcgtcttcgacctagag
cccagcgaagaagcccaactgcgcgaaatcgtaagcgatggcatggtcggcgcgctggaa
ctcgcctgccccatcgaaatcgaaatcggcctaggcgacaactggctcgaagcacactaa
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