Coraliomargarita algicola: SH580_08640
Help
Entry
SH580_08640 CDS
T10130
Name
(GenBank) HU family DNA-binding protein
KO
K05788
integration host factor subunit beta
Organism
calg Coraliomargarita algicola
Brite
KEGG Orthology (KO) [BR:
calg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
calg03032
]
SH580_08640
03036 Chromosome and associated proteins [BR:
calg03036
]
SH580_08640
03400 DNA repair and recombination proteins [BR:
calg03400
]
SH580_08640
DNA replication proteins [BR:
calg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SH580_08640
Chromosome and associated proteins [BR:
calg03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
SH580_08640
DNA repair and recombination proteins [BR:
calg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
SH580_08640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HU-DNA_bdg
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
WPJ97777
UniProt:
A0ABZ0RS98
LinkDB
All DBs
Position
complement(2199117..2199425)
Genome browser
AA seq
102 aa
AA seq
DB search
MSNNLTKRDIVLDIYDKTDFPQKEVRETVQLTLDAIARALSEGRNVELRNFGVFEVQIRK
SRIGRNPNKPETDVVIPKRAVIKFKAGKELKAQLQDLDVDAL
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atgtccaataaccttacaaaacgcgatatcgttctagatatctacgataaaactgatttt
ccgcaaaaagaagtgcgagaaactgtgcaactgactctcgacgcgatcgccagagcgctg
agcgagggacgtaatgttgagctgcgcaacttcggtgtattcgaagtgcagattcgcaaa
tctcgcatcggtcgcaacccgaataagccggagactgacgtcgtcattcctaagcgtgcc
gtgatcaagttcaaggctggcaaggagttgaaggctcagcttcaggacttggacgtggat
gctctgtaa
DBGET
integrated database retrieval system
