Coraliomargarita algicola: SH580_09930
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Entry
SH580_09930 CDS
T10130
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
calg Coraliomargarita algicola
Brite
KEGG Orthology (KO) [BR:
calg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
calg03400
]
SH580_09930
Enzymes [BR:
calg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SH580_09930
DNA repair and recombination proteins [BR:
calg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SH580_09930
Prokaryotic type
SH580_09930
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WPJ98020
UniProt:
A0ABZ0RSS6
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All DBs
Position
complement(2486735..2488162)
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AA seq
475 aa
AA seq
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MSPTLLWFRKDLRLADNSALAAAIELGAPIVPVFIWAPEEAGAWAPGAASKWWLHQALKG
LREELRAQGGELILREGTSLAELRDIIKTTGATRVLWNRRYESSLRELDAQVKRALREDG
LQVESFNSSLLNEPHTAATGSGQPYKVYTPYWKKVKDRPLPPLALPDLPAMRFPESFPWS
TPLESLNLLPAIPWYRGFETHWLPTEAAARGRLDQFLSAAVEDYATGRDRPDCDGTSCLS
PYLHWGQIGPRQVMAALADRTDLAGAGASVYAKEIYWREFAYNVLYHFPHTPDQALRAEY
DSFPWESDDAVLKAWQMGQTGYPIVDAGMRQLWQTGWMHNRVRMIVSSFLVKHLLHDWRA
GAKWFWDTLVDADLASNTLGWQWSGGCGADAAPYFRVFNPILQGQKFDPEGAYVKRYLPE
LRKMPAKYMHVPWEAPDSILEYAGVEIGKNYPAPIIDHKVGRARALAALEQFKSA
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctactcttctttggtttcgcaaggatttgcgacttgctgataattctgcgcta
gcagctgcaattgagttgggggcaccaatcgtgccggtatttatctgggcgcccgaggag
gcgggggcctgggcacctggggctgcatcgaagtggtggctacatcaagccctgaagggc
ctgagagaggagttgagggcgcagggcggagagttgattctgcgcgaggggacttcactc
gccgagttgagggatattattaaaacgacgggggccacgcgtgtcttgtggaatcgacgt
tatgaatcgtctctgcgggagttagacgcgcaggtcaagcgtgccctgcgagaggacggt
cttcaggtggagagttttaatagtagcttgctcaacgagccacacaccgcggcaactgga
agcgggcaaccatacaaagtgtatactccctattggaaaaaagttaaagaccggcctctg
cctccacttgcactgcctgatttgcccgcgatgcgtttccccgagagctttccgtggtcc
acgccgctggaatcgctgaatttactgccagcgattccgtggtatcgcggctttgagacg
cactggttgcctacggaagcggcggcgcgggggcggctggatcaatttctttctgctgcg
gttgaggactatgctaccgggcgggatcgacctgattgcgacgggacttcatgcttgtct
ccctatttgcattgggggcagatcgggccgcgtcaagtaatggcagcgctcgccgatagg
actgatctcgctggtgcaggtgcgtctgtttacgccaaggagatctactggcgcgagttt
gcttacaatgtgttgtatcattttccgcatacgcccgaccaagcgctgcgagcggagtat
gacagctttccatgggagtcggatgatgccgtcctgaaagcatggcaaatggggcagacg
gggtatccgattgtcgatgcgggtatgcggcagctgtggcagacgggttggatgcacaac
cgggtgcgaatgattgtctcctcgtttctagtgaagcacttgctacacgactggcgtgcg
ggtgcgaagtggttttgggacactttggtcgatgccgaccttgcgagtaatacgctcggt
tggcaatggagtggtggctgtggcgccgatgctgctccctattttcgtgtctttaatccg
attttacagggccagaaatttgaccctgagggggcgtatgtgaagcgctacctgccggaa
ctgcgaaaaatgccagccaagtatatgcatgtcccgtgggaggcaccggattcgattctg
gaatatgccggagttgaaattggcaaaaactatcctgctcccatcattgatcataaagtg
ggtcgagcgcgtgctcttgctgctttggagcaatttaaatcagcttag
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