Coraliomargarita algicola: SH580_10060
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Entry
SH580_10060 CDS
T10130
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
calg Coraliomargarita algicola
Pathway
calg03030
DNA replication
calg03430
Mismatch repair
calg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
calg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SH580_10060 (dnaX)
03430 Mismatch repair
SH580_10060 (dnaX)
03440 Homologous recombination
SH580_10060 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
calg03032
]
SH580_10060 (dnaX)
03400 DNA repair and recombination proteins [BR:
calg03400
]
SH580_10060 (dnaX)
Enzymes [BR:
calg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SH580_10060 (dnaX)
DNA replication proteins [BR:
calg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SH580_10060 (dnaX)
DNA repair and recombination proteins [BR:
calg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SH580_10060 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_5
AAA_22
AAA_30
RuvB_N
AAA_16
RCF1-5-like_lid
DNA_pol3_gamma3
TIP49
ResIII
AAA_14
AAA_19
AAA_7
AAA_24
bpMoxR
Sigma54_activ_2
AAA_2
DUF815
Mg_chelatase
PIF1
AAA_assoc_2
AAA_6
SRP54
RNA_helicase
WH2
Motif
Other DBs
NCBI-ProteinID:
WPJ98045
LinkDB
All DBs
Position
complement(2519087..2520229)
Genome browser
AA seq
380 aa
AA seq
DB search
MEKGYQVIARRWRPKQFSELVGQDHIVRTLSNAIESKRIAHAYLFVGPRGTGKTSTARLF
AKALNAEGGPSATPDNESETSQAIMNGSCMDVIEIDGASNNSVEQVRSLREECQFAPAQC
TYKIYIIDEVHMLSTAAFNALLKTLEEPPEHVKFFFATTEAHKVLPTIVSRCQRFEFRPI
SDDVIVGKLTEICESEEIQVEPAALASIARLANGGMRDAQSILDQMISFCGSDIKESDVL
DVYGLVSDERIAQLAQALASLDYAAIIAAVDEFAVEGRDLFRILIDLEAHARGALLDAIQ
NGGNTTKLGGEMSTESIMRMLDALHRGEASVQKGLSEKVNFEVVLLKAAEESRSRAIDSL
IKQVAAAGGGAGDAGEKKKP
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaggttatcaagtcatcgcgcgccgctggcgtcctaagcagttcagtgaattg
gtggggcaagatcacatcgtgcgcaccttgagtaatgccatcgagagcaagcgcattgcg
cacgcctatctctttgtcggcccacgcggcacggggaagactagcaccgctcgtttgttc
gccaaagcgctcaatgccgaggggggaccgagtgccacgcccgataatgagtccgagacc
agtcaggccattatgaacggctcctgcatggatgtgatcgaaatcgacggtgcgtccaat
aatagcgtcgagcaagtgcgcagtctgcgtgaggagtgccaatttgcaccggcccagtgc
acttataagatctacatcatcgacgaggtgcacatgctctcgacggctgcgttcaacgcc
ttgttgaaaactctggaagagccgcccgagcatgtgaagttcttctttgccaccaccgag
gcgcacaaggtgctgcctaccatcgtctcgcgctgtcaacgctttgagtttcgcccgatt
tcggacgatgtgatcgtcggaaagttgaccgagatttgcgaatcagaggagattcaagtc
gagccagccgctctggcatcgattgctcgcctcgccaatggcgggatgcgtgatgcccaa
tcgattctcgatcaaatgatttctttttgtggcagcgatattaaagagagtgatgtgctc
gacgtctatggcttggtttcggatgagcggatcgctcagttggcgcaggcgcttgcctcc
ttggattacgcagccattatcgcagcggtggatgagtttgcagtcgaaggacgcgacctc
tttcgcatcttgatcgaccttgaagcacacgcacgtggagcattgcttgatgccattcaa
aatggtggcaatacgaccaaactgggcggcgagatgagcaccgagtcgattatgcgtatg
ctcgatgccttgcaccgaggagaagcgtccgtgcagaagggcctttccgagaaagtgaat
ttcgaagtcgtgctcttaaaagcagctgaagagtctcgctcgcgtgcgatcgacagcttg
atcaagcaagtggctgcagctggtggtggagccggtgatgccggcgaaaaaaaaaagccc
tag
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