KEGG   Coraliomargarita algicola: SH580_11525
Entry
SH580_11525       CDS       T10130                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
calg  Coraliomargarita algicola
Brite
KEGG Orthology (KO) [BR:calg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:calg03016]
    SH580_11525 (truB)
Enzymes [BR:calg01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     SH580_11525 (truB)
Transfer RNA biogenesis [BR:calg03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    SH580_11525 (truB)
 Prokaryotic type
    SH580_11525 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2 PseudoU_synth_2 DKCLD
Other DBs
NCBI-ProteinID: WPJ94064
UniProt: A0ABZ0RD38
LinkDB
Position
complement(2847435..2848163)
AA seq 242 aa
MSQLTNDAPEGILLVDKPQGITSHDVVAKMRRVFHMKKVGHAGTLDPMATGMLLILIGKA
TKASQYLMSMDKEYTGRVKLGVITDSQDADGEITEERPVPELTEVQVKAEMKTFIGDQYQ
TPPMFSAKKINGQKLYKLARQGKTVEREPRVIHISRFDITQFALPEISFIVGTSKGAYVR
TIAHDLGERLGCGGHLNELRRTAVGQFRIENASTIEELENMSPSTLRKQLIPVIQAVPSH
AL
NT seq 729 nt   +upstreamnt  +downstreamnt
atgtctcaactcaccaatgacgcgccggaaggcatcctcttagtcgataagccgcagggc
attacttcgcacgatgtcgtggcgaagatgcgtcgtgtctttcacatgaaaaaggtcggc
catgctggcacgctggaccccatggcgactggcatgctcctcatcctgatcggcaaggcc
accaaggcctcgcagtatttgatgagtatggacaaggaatacacggggcgtgtgaagctc
ggtgtgatcaccgactcgcaggacgccgatggtgagatcactgaagagcgacccgtgccc
gagctgactgaggtgcaagtcaaagcggaaatgaagacctttatcggtgatcaatatcag
acgcctccaatgttttcggccaagaaaatcaatggtcaaaagctctacaagctcgctcgc
caaggtaagacggttgagcgtgagccgcgtgtcattcatatcagccgcttcgatattact
cagtttgcactgcccgaaatctcattcatcgtcggcacgagcaaaggcgcttatgttcgc
accatcgcgcatgatctgggggagcgcctcggttgtggtgggcatttaaacgaactgcgc
cgcacagctgttggacaatttcgtattgaaaatgcctctaccatcgaggaattggagaac
atgtcgccgtccactctgcgtaaacagttgatccccgtgattcaagcggtgccgagccac
gcgctgtaa

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