Coraliomargarita algicola: SH580_11615
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Entry
SH580_11615 CDS
T10130
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
calg Coraliomargarita algicola
Brite
Transcription machinery [BR:
calg03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
SH580_11615 (rapA)
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GFIT
Other DBs
NCBI-ProteinID:
WPJ94081
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Position
2868697..2871540
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AA seq
947 aa
AA seq
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MANFTIGQRWISETEPELGLGILEEADRRQVRIVFSAANEARIYATANAPIKRVEFHVGD
SIHSQQGQTIVIEEVKEEAGILTYIGGGVEVPEMELADSISFSKPEDRLIGGQIDQSAAF
KLRYEAITRLAHARQSDVAGFVGGRIDLIPHQLYIASEVANRYMPRVLLADEVGLGKTIE
ACLILHRLHLTGRAERILIVLPESLVHQWFIELLRRFNLWFTLIDTEHCEAVTAVDPDTN
PFNEKQLVICSIKTLTEQSRWRECALNARWDMLVVDEAHHLEWTPEFVSPEYKLVESLTQ
KSHGLLLLTATPEQLGAEGHFARLRLLDPERYPDLDKFRKEQAGYSKVAAVANKIVGREQ
LNDEDIKYLREAFAERSDDEFQQHLQKPQALLQELVDRHGTGRVIFRNSRDTLTGFPERK
GSPCQLKPRAKLAKAELEQRLLREFDLEATGSSTPEPYDFRHGPRILWLSKLLKELSDNE
KVLLICRTREKVQAIYDALLEEVNVKAALFHEELTLVQRDRNAAWFAESDGAKILLCSEI
GSEGRNFQFANHLVLFDLPLNPELLEQRIGRLDRIGQTKTIQIHMPYLKHSWTELLMRWH
HEGLNGVEHSLKGGYAYINKFGESIRSLGPRYHIADAATLKEADQLIKESASFREDLERK
LSQGQDRLIALNSFREEASAELVSHIRTLDADRTLDQFMNRIFDHFGVNVEDIDARTFRL
EPGQLFTDSFPELPEEGITVTCERTKALGREDIAFLTWDHPMVRGAIDLTLSSEKGNSSI
VVWSEPGIKAPAILIEAIYVLESVAPPRLHVDRFLPPTPVRVLIDLSGKDCSEEYSHDYI
NKYCNDEEAFRLKQDPTLLQALVPQMLRAAKEHARTQKSELLQAAMHQAHERLDGEATRL
KELRKVNPNVREEEIRIAENVITDVTKHIAKAHLRLDAVRLILGEPG
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atggcaaattttacgattggacaacgctggatcagcgaaacagaaccagagctcgggctc
ggcattttagaagaggccgatcggcgccaagtgcgcatcgttttttcagcggccaatgag
gcgcgcatctacgcaacggccaatgcccccatcaagcgagtagaattccacgtgggcgac
agcatccattcacaacaaggccagaccatcgtcatagaggaagtcaaagaagaagcggga
atcctgacctatattggcgggggcgtcgaagtgcctgaaatggagctggccgacagtatt
agcttcagcaagcctgaagatcgcttaatcgggggacaaatcgatcaatccgctgcgttt
aaactgcgctacgaagccattacacgcctcgctcatgccagacaatcggatgtagctggc
tttgtcggaggccgcatcgacctaatcccgcaccagctctatatcgcatccgaagtggcc
aatcgctacatgccacgcgtcctccttgccgatgaagttggcttgggtaaaacaattgaa
gcctgcctgatcctacaccgcttacacctgactggccgcgcagaacgcatcctgatcgta
ctccctgaatcgctggtgcaccagtggttcatcgaattactgcgccgttttaatctctgg
ttcacactcatcgacacagaacattgcgaagctgtaaccgcggtggacccagatacgaac
ccttttaacgaaaagcaactggtcatatgtagtatcaagactctgaccgaacagtcgcgc
tggcgagaatgtgcactcaacgctcgctgggatatgctagtagtcgacgaagcacaccac
ttggaatggactccagaattcgtcagccctgaatataaactcgtcgagagcctgacccaa
aagagccacggactactactgctgaccgccactccggagcaacttggcgccgaggggcac
ttcgcgcgcttacgcctgctcgacccagagcgttaccctgatttggacaaatttcgcaaa
gagcaagccggctactcaaaggtggccgcagttgccaataagatcgtaggccgcgaacaa
ttaaacgatgaagatatcaaatatctacgcgaggctttcgctgaacgcagcgacgacgaa
ttccagcagcatctacaaaagccacaagcactgctgcaagaattagtggaccgccacgga
acaggacgcgtcatcttccgaaattcacgcgacaccttaactggatttccagagcgcaag
ggctccccttgccaactcaagccacgagctaaactagccaaagccgaactggagcagcga
ctcttgcgcgaattcgacctggaagctaccggttctagcaccccagaaccttatgacttc
cgacatggccctcgtatcctatggctgtccaaacttctcaaagaactcagcgacaatgaa
aaagtgctgctcatctgccgcactcgtgaaaaagtccaagccatctacgatgcactattg
gaagaagttaatgtcaaagcggcactcttccacgaagaactcacactggtacaacgtgac
cgcaatgctgcatggtttgctgaatccgacggcgcaaaaatactactctgctctgaaatt
ggcagcgaaggccgcaacttccaatttgccaatcacttggtgctgttcgatctccccctc
aatccagaactactggagcaacgaatcggtcgactggaccgaatagggcagaccaagacc
atccaaatccacatgccttacctcaagcatagttggacggaactactcatgcgctggcac
cacgaaggcttaaatggagtcgaacactcactcaaaggtggctatgcctatatcaataaa
ttcggcgagtcgatacgctcacttggcccacgctatcatatcgccgacgctgcgacactg
aaagaagccgatcaactcatcaaagaaagcgcaagctttcgagaagacttggaacggaaa
ctcagtcaaggacaagacaggctgatcgcactcaactctttccgcgaagaagcctcggcc
gaactggtgagtcacatccgcacgctggatgcggatcgcaccttagaccaattcatgaac
cgaatattcgaccatttcggcgtcaacgtagaggacatcgatgcacgcaccttccgccta
gagcctggacaactctttaccgattctttcccagaactaccagaggaaggcatcacagtc
acctgcgagcgcaccaaagccctcggccgggaagacatcgccttcttaacttgggaccat
ccaatggtccgcggtgccatcgacctcactctcagctcagagaagggcaatagctcaata
gtcgtctggtcagagccgggcatcaaagccccagcgatcctaattgaagccatctatgta
ctggaaagcgtagccccgccacgcctacacgtagaccgctttctgccccccacacctgta
agggtgttaatcgatctaagcggcaaggattgtagcgaggaatacagtcacgattacatt
aataaatactgcaacgacgaagaggccttccgcctgaaacaagatccaacactactccaa
gcactggtcccacagatgctgcgtgctgccaaagaacatgcccgcacacaaaaatccgag
ctattacaagctgccatgcaccaagctcacgaacgtctcgatggtgaagcaacacgcctg
aaagagctacgcaaggtcaaccccaacgttcgtgaagaagaaataagaatcgcagaaaat
gtgattaccgacgtcactaaacacatcgccaaagcacacctacgcctcgatgccgtgcgc
ctgattctaggcgagcccggctaa
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