Coraliomargarita algicola: SH580_11685
Help
Entry
SH580_11685 CDS
T10130
Symbol
dnaN
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
calg Coraliomargarita algicola
Pathway
calg03030
DNA replication
calg03430
Mismatch repair
calg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
calg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SH580_11685 (dnaN)
03430 Mismatch repair
SH580_11685 (dnaN)
03440 Homologous recombination
SH580_11685 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
calg03032
]
SH580_11685 (dnaN)
03400 DNA repair and recombination proteins [BR:
calg03400
]
SH580_11685 (dnaN)
Enzymes [BR:
calg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SH580_11685 (dnaN)
DNA replication proteins [BR:
calg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SH580_11685 (dnaN)
DNA repair and recombination proteins [BR:
calg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SH580_11685 (dnaN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
DUF5663
Motif
Other DBs
NCBI-ProteinID:
WPJ94095
UniProt:
A0ABZ0RD69
LinkDB
All DBs
Position
2884443..2885570
Genome browser
AA seq
375 aa
AA seq
DB search
MKFKINQDHFSNGLQQVLNVVATRSTMPILSNVLIEAEEGHISLTTTNLDLGIRCRIKAE
VSEPGSTTLPVRKLATIVRELPVNEVFVETSDSNQAKITSGGSLFKIMGLSAEEFPPLPT
FENRKVFELSQDKIVNMLKSVSYAQSTDENRYILNGVYFNFADEKLTLVATDGRRLGLTA
LELEISEDNAGSLILPAKTVGELERLMGKGEAVKVAFNDRQAAFEIAIDEAGDSGLIDHL
YLVSKIVEGNYPNYRQVIPKETEHRVKIERELMLECVHRAALVTSDKSNSVKLKVSKNLL
EISGSSTEYGESHESMAIAYDGPEVQVAFNPQFLMEPLKALTKDEVFFEFKDELSPGLFK
TLDNFICVIMPLRLN
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcaagatcaaccaggatcattttagcaacggcctccaacaagttctcaacgtt
gttgcgactcgttctaccatgcccatcctcagcaatgtgctgatcgaagccgaggagggt
cacatttcgctgactacaaccaaccttgaccttggcattcgttgccgaatcaaggctgag
gtttctgaacctggcagcacgacattgccagttcgcaaattggcgacaatcgtgcgtgag
cttccggtcaacgaggtatttgttgaaaccagtgatagcaaccaggcgaagattacatcg
ggtggttcacttttcaaaatcatgggtttgagtgctgaggagtttccaccgttgcctact
tttgagaatcgtaaagtctttgagctttcgcaggacaaaatcgtaaacatgctcaagagc
gtgtcttacgctcaatccacggatgagaatcgctacatcctcaacggtgtatactttaac
tttgcggatgagaaattgacgctggtggcgacggatggacgccgtcttggtttgactgcg
ctggaactagaaatcagcgaagacaatgcgggcagcctaattttgcctgccaagacagtg
ggcgagctggagcgtttgatgggcaagggagaagctgtgaaggtcgccttcaacgatcgt
caggcagcttttgaaatcgcgatcgatgaagcgggcgattccggtttgattgaccacctc
tatctcgtatccaagattgtagaaggtaactacccgaattatcgtcaagtcatccctaag
gaaacagagcaccgagtcaaaatcgagcgtgagttaatgcttgaatgcgtgcaccgtgca
gctttggtgacatcggacaagagtaactctgtaaagcttaaggtgagtaagaacctgctg
gaaatctctggctcgtcgactgaatatggtgaatcgcacgaatcgatggcgatcgcttat
gatggccctgaggtgcaagtcgcgttcaatccacaatttttaatggagccgcttaaggct
ttgactaaggatgaggtcttcttcgagttcaaggatgagctcagcccggggctattcaag
acattggataacttcatctgtgtgatcatgccactgcgcttgaactaa
DBGET
integrated database retrieval system