KEGG   Coraliomargarita algicola: SH580_11685
Entry
SH580_11685       CDS       T10130                                 
Symbol
dnaN
Name
(GenBank) DNA polymerase III subunit beta
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
calg  Coraliomargarita algicola
Pathway
calg03030  DNA replication
calg03430  Mismatch repair
calg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:calg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SH580_11685 (dnaN)
   03430 Mismatch repair
    SH580_11685 (dnaN)
   03440 Homologous recombination
    SH580_11685 (dnaN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:calg03032]
    SH580_11685 (dnaN)
   03400 DNA repair and recombination proteins [BR:calg03400]
    SH580_11685 (dnaN)
Enzymes [BR:calg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SH580_11685 (dnaN)
DNA replication proteins [BR:calg03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SH580_11685 (dnaN)
DNA repair and recombination proteins [BR:calg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SH580_11685 (dnaN)
SSDB
Motif
Pfam: DNA_pol3_beta DNA_pol3_beta_2 DNA_pol3_beta_3 DUF5663
Other DBs
NCBI-ProteinID: WPJ94095
UniProt: A0ABZ0RD69
LinkDB
Position
2884443..2885570
AA seq 375 aa
MKFKINQDHFSNGLQQVLNVVATRSTMPILSNVLIEAEEGHISLTTTNLDLGIRCRIKAE
VSEPGSTTLPVRKLATIVRELPVNEVFVETSDSNQAKITSGGSLFKIMGLSAEEFPPLPT
FENRKVFELSQDKIVNMLKSVSYAQSTDENRYILNGVYFNFADEKLTLVATDGRRLGLTA
LELEISEDNAGSLILPAKTVGELERLMGKGEAVKVAFNDRQAAFEIAIDEAGDSGLIDHL
YLVSKIVEGNYPNYRQVIPKETEHRVKIERELMLECVHRAALVTSDKSNSVKLKVSKNLL
EISGSSTEYGESHESMAIAYDGPEVQVAFNPQFLMEPLKALTKDEVFFEFKDELSPGLFK
TLDNFICVIMPLRLN
NT seq 1128 nt   +upstreamnt  +downstreamnt
atgaagttcaagatcaaccaggatcattttagcaacggcctccaacaagttctcaacgtt
gttgcgactcgttctaccatgcccatcctcagcaatgtgctgatcgaagccgaggagggt
cacatttcgctgactacaaccaaccttgaccttggcattcgttgccgaatcaaggctgag
gtttctgaacctggcagcacgacattgccagttcgcaaattggcgacaatcgtgcgtgag
cttccggtcaacgaggtatttgttgaaaccagtgatagcaaccaggcgaagattacatcg
ggtggttcacttttcaaaatcatgggtttgagtgctgaggagtttccaccgttgcctact
tttgagaatcgtaaagtctttgagctttcgcaggacaaaatcgtaaacatgctcaagagc
gtgtcttacgctcaatccacggatgagaatcgctacatcctcaacggtgtatactttaac
tttgcggatgagaaattgacgctggtggcgacggatggacgccgtcttggtttgactgcg
ctggaactagaaatcagcgaagacaatgcgggcagcctaattttgcctgccaagacagtg
ggcgagctggagcgtttgatgggcaagggagaagctgtgaaggtcgccttcaacgatcgt
caggcagcttttgaaatcgcgatcgatgaagcgggcgattccggtttgattgaccacctc
tatctcgtatccaagattgtagaaggtaactacccgaattatcgtcaagtcatccctaag
gaaacagagcaccgagtcaaaatcgagcgtgagttaatgcttgaatgcgtgcaccgtgca
gctttggtgacatcggacaagagtaactctgtaaagcttaaggtgagtaagaacctgctg
gaaatctctggctcgtcgactgaatatggtgaatcgcacgaatcgatggcgatcgcttat
gatggccctgaggtgcaagtcgcgttcaatccacaatttttaatggagccgcttaaggct
ttgactaaggatgaggtcttcttcgagttcaaggatgagctcagcccggggctattcaag
acattggataacttcatctgtgtgatcatgccactgcgcttgaactaa

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