Coraliomargarita algicola: SH580_13325
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Entry
SH580_13325 CDS
T10130
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
calg Coraliomargarita algicola
Pathway
calg02024
Quorum sensing
calg03060
Protein export
calg03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
calg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
SH580_13325 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SH580_13325 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SH580_13325 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
calg02044
]
SH580_13325 (secD)
Secretion system [BR:
calg02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
SH580_13325 (secD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
MMPL
Sec_GG
PCDH15_12th
DUF5056
Motif
Other DBs
NCBI-ProteinID:
WPJ94414
UniProt:
A0ABZ0RN85
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All DBs
Position
3280774..3283320
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AA seq
848 aa
AA seq
DB search
MSGNILWKFLLTAAIIFWCVMSITPLQDRPFEDYIVSQVTADQAEFTDVLQRAQARVDAG
DSPTLFIALRDLGVEEAINYAKFFPQINVADIANQDKRNDILLKHILKKAQSQLRLGLDL
KGGVGVTLKIDESSQAELNQFEQAEQLKDAISIMAERLDGMGVAEPVIRASGDNAIEIQL
AGLSTKDNPEVIDAVKKPARLEFRAVHPSLTPDTTPANRYPVGYEVLAEEIEDHRSGETY
ERRQFVKLIPEATGEIVDDAFASQTQAGGFQINLVMTSEGADIFRSVTERMVGQPLAIVL
DGKLYSAPTIQGVLSKNAQITGNFSQREAIELANVLNNPLAVELRVDEMYEVGPTMAAGA
RDSSISAAQWGAIAVVGFMVVYYFLGGLVAVVSALINVVIVLGVLASLGATLTLPGVAAL
VLTLGMGVDANILIFERLREELRAGKSIKNATAGAFEKVTSTIVDANVTTLITASILIWL
GTGPVKGFGVTLAIGICASIFCALVVTRFMVDFLVHRVGVSSILGLEMFGEKKFDFFQFR
KPAFIGSWVIVLIGVISVVIHHDNILGKDFTGGDEMTVNYSQQIGTDQLMEVIEAQDLID
VTAHYQSLIGEDREVLKIQTPFDQARVTLEALQRAFPEAGFEEAGINQIGASVSKNIQWN
ALISVLTALAGILLYVALRFEVGYGVGAVVATIHDVLMTIGIFVICGELGLFVSGQFTAP
MLAAILMIVGYSINDTIVAFDRIREELELNPGMDLRSIINLSISRVFSRTLLTSITTLLA
AVSLYVFGAGVINDLAFVFIVGIITGTFSSIFIASPVFYWWHKGSRRHVEERQLTPKRYE
WESQKEEA
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgtccggaaacattctttggaaatttctactcaccgccgccattattttttggtgtgtg
atgagcatcacgcccttgcaggatcgtcctttcgaggattacatcgtgtctcaagtcacg
gccgatcaggcggagtttactgatgtgctccagcgcgcgcaggctcgtgtggatgccggg
gactcgccgacgctctttattgcgttacgcgatctgggggttgaggaggcgattaattac
gcgaagttctttccgcagatcaatgttgccgatatcgcgaatcaggataagcgcaacgac
attctgctcaagcacatcttgaaaaaggcgcagagccagcttcgcctcggtctcgacctg
aagggcggcgtgggtgtgacgctcaagattgatgagtcttcgcaggctgaactcaatcag
tttgagcaagctgagcagcttaaggatgcgattagcatcatggccgagcgtcttgacggt
atgggcgtggcagagcccgtcatccgtgccagtggtgataacgcgatcgagatccaactt
gctgggctgtccactaaggataatcctgaggtgattgatgcagttaaaaagcctgcccgt
ttggaatttcgtgccgtgcatcctagtctgactccagacacgactccagccaaccgttat
ccggtcggctacgaagtgctggcagaagaaatcgaagatcatcgttccggggaaacttat
gaacgccgccaattcgtgaagctcattcctgaggcgactggcgagatcgttgacgatgcc
tttgcttcgcaaacgcaagctggcggcttccaaatcaatcttgtgatgacgagtgagggc
gccgatatcttccgttcggtgacggagcgtatggtcggccagcctttggcgattgttctg
gatggcaaactgtattccgcacccacgattcaaggcgtgctctcgaagaacgctcagatc
acaggtaacttttcgcagcgtgaagcgattgaactggccaatgtgttgaataatccactc
gccgttgaattacgcgtcgacgaaatgtatgaagtcggcccaacgatggcagccggcgca
cgtgatagttcgatcagtgcggctcagtggggtgccattgcggtggttggcttcatggtg
gtttattatttcctcggtggcttggtcgccgtggtgtcggctttgattaatgtggtgatt
gtgctaggcgtgcttgccagccttggtgctactttgacattgccaggtgtggccgctttg
gtgctcacgcttgggatgggtgtggatgcgaatattttgattttcgagcgtctgcgtgag
gagctccgcgctggtaagagtatcaagaatgcgactgcaggtgcttttgagaaggtgact
tcgaccattgtggatgctaatgtgacgacgctgatcactgcttcgattttgatctggctg
ggcacggggcccgtaaagggcttcggtgtgacgcttgcgattggtatctgtgcgtcgata
ttctgtgccttggtcgtcactcgcttcatggtcgacttcctggtccatcgtgtgggtgtt
tccagtattctcggtcttgagatgtttggtgagaagaagttcgacttcttccaattccgt
aagcctgcatttattggttcatgggtgattgtgttgatcggtgtcatcagtgttgtgatt
catcatgataacatcctcggtaaggactttactggtggtgacgaaatgacggtcaactac
tctcagcaaatcgggactgaccagttaatggaagtcatcgaggcgcaagacttgatcgat
gtgacggcacactaccaaagcctcatcggtgaagaccgtgaagtgctcaagattcaaaca
ccttttgatcaagcccgtgtcacgctggaggcattgcaacgtgccttcccggaagcaggc
ttcgaagaggcgggcatcaatcaaattggtgcatccgtttctaagaacattcagtggaac
gctctaatttccgtgctgaccgcgctggctggcattttgctctacgttgccttgcgtttc
gaagtcggttacggtgtcggtgccgtggtggcgacgattcacgacgtgctgatgacgatc
ggtatttttgtgatctgcggcgagcttggcctctttgttagcggccagttcacagcgcct
atgcttgcggcgattctgatgattgtcggttactcgatcaatgataccattgtggccttc
gaccgtattcgtgaggagttggagctcaatcctggcatggatttgcgtagcattatcaat
ctttcgatcagccgtgtgttttcgcgcaccttgctgaccagtatcacgaccttgttggct
gcggtttcgctgtatgtcttcggcgctggtgtgattaatgatttagctttcgtctttatc
gtcggtattatcaccggcacgttctcttcgattttcattgcgagccccgtattctattgg
tggcacaaggggagtcgtcgtcacgtagaggagcgtcagcttacaccaaaacgctacgag
tgggagagccagaaggaagaagcctag
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