Coraliomargarita algicola: SH580_13360
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Entry
SH580_13360 CDS
T10130
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
calg Coraliomargarita algicola
Pathway
calg00550
Peptidoglycan biosynthesis
calg01100
Metabolic pathways
calg01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
calg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SH580_13360 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SH580_13360 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
calg01011
]
SH580_13360 (mrdA)
Enzymes [BR:
calg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SH580_13360 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
calg01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
SH580_13360 (mrdA)
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Pneumovirus_M2
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
WPJ94421
UniProt:
A0ABZ0REH9
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All DBs
Position
3289942..3291894
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AA seq
650 aa
AA seq
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MSGYDFHRGENPRILFFFWIVMAAGITLLVGLGWRQLIAYQKYEEIERRQTERRIFKPGP
RGDIYDRKGNLLVGNRPQYSAVVYLDDLRREFRSEYSQIIRAEREKLRQAYEQTPESERE
DSQLTPNYNDLQWIARQNVIQRYIDQINRITGRDDSLSMRKIIRHFNEQLLLPLPLVEDL
NADQYARLIEQVPVKSAIQIHTDTARYYPYGVAAAHTLGYVQNVNPDPDEIPDDGIKTFT
FKTKRGKTGLERHFNDLLSGETGTEIWRVDPLGFQDSMLEMKTPKQGQDLITSIDIDLQL
AAETALGERTGAAVALDIHSGEVLAIASHPSYDLNDLSPFIPRNTFDEINERGAWLNRAV
QLSYPPGSTFKLITSIAGMRHGSMTPETEHDCQGLYRLGNRIFRCNARYGHGIVDLAASI
EASCNVFYYAEGLEMGIDVLSAEAKRFGLDQKTGIQIPFETSRLVVPSKEWKREQIGSGW
VPGDTANTAIGQGFLLVTPLQMATVIASIARNETRTQPTLRALTNEEVQRVEHGGEAIGL
TQKQHDALWEGMERVVGQDGTGRLVQIDGLRIAGKTGTADFRAHGKGVNLAWFVGFAPVE
NPQIAVAVMVEGTNASERYHGGSTAGPVAKDILLEFIEQYPERAGFSAAR
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgagcggctacgactttcatcgcggtgagaaccctcgtattctctttttcttctggatc
gtgatggcggctggtatcaccctgctggtaggcttgggatggcggcagttgattgcctac
caaaagtatgaggaaatcgagaggcgccaaacggagcggcgtattttcaagccaggccca
cgcggtgatatctatgatcgcaaaggcaaccttctggtcggcaaccgaccgcaatactcc
gcagtcgtttatctcgatgacctgcggcgtgaatttcgcagtgagtattcgcaaattatt
cgtgccgaacgcgagaaactgaggcaggcctatgagcagacgcccgaatccgagcgtgaa
gattcacagctgacgccaaattataatgatctgcaatggatcgctcgccaaaacgtgatt
cagcgctacatcgatcagatcaatcgaatcaccggacgagacgacagcttgtccatgcgt
aagataattcgccattttaatgagcaactcctactacccttgcccttagtcgaagacctc
aatgcggatcaatatgcccgcctgattgagcaagtgcctgtgaagtcagccatccagata
cataccgataccgcacgctattatccctacggagtcgccgcagcgcatacactcggctac
gtgcaaaatgtgaatccagaccctgatgaaattcccgatgatgggattaagacttttacc
tttaaaaccaagcgcgggaaaaccggcctcgaacgacattttaacgatttgttatctggc
gagacgggcactgagatttggcgtgtcgatcccctcggatttcaagattccatgctagag
atgaagacgcccaagcaggggcaggacttgatcactagcatcgacatcgacttgcagttg
gcagctgaaaccgcgctcggcgagcgcacgggcgcagcagttgcgttagacatacattcc
ggcgaggtactggccattgccagtcatcccagttatgacctcaatgacctcagccccttt
attccacgcaacacattcgacgagatcaacgagcgtggtgcttggcttaatcgcgccgtc
cagctgtcttaccctccaggatccacgttcaaactcatcacctcgatcgctggtatgcgg
catggctcgatgacgcctgagacggaacatgactgccaaggactctatcgtttaggcaat
cgcatctttcgttgtaatgcccgctacggccacggaattgttgatctagccgcctcgatt
gaagcgagttgcaacgtgttttattatgccgaagggctggagatgggaatcgatgtatta
agtgccgaggccaaacgcttcggtctggatcaaaagaccggcattcagattccctttgaa
accagtcgtttggtagtgccaagtaaagagtggaagcgtgagcagatcggttccggttgg
gtgccaggagatacagccaacaccgcgatcggccaaggcttcttgctcgttaccccctta
cagatggcgacagtgattgcatccattgcgcgcaatgaaacgcgcactcagcccacttta
cgcgcattgaccaatgaggaggtccagcgagtcgaacacggaggcgaagcaattggctta
acgcaaaagcagcatgatgcactttgggaggggatggagcgtgtcgttggtcaagacggc
actggtcgcttagtgcagatcgatggtttgcgcattgccggtaagaccggcaccgcggat
tttcgtgctcacggcaaaggcgtcaatttagcatggtttgtaggttttgccccggtagag
aatccgcagatcgccgtcgccgtcatggtcgaaggtaccaatgccagtgaacgctaccac
ggaggttccaccgctggtcccgtagccaaagacatcttattagaatttatcgagcagtat
cccgagcgcgcaggtttttcagccgcaagatag
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