Coraliomargarita algicola: SH580_14475
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Entry
SH580_14475 CDS
T10130
Name
(GenBank) HRDC domain-containing protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
calg Coraliomargarita algicola
Brite
Enzymes [BR:
calg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
SH580_14475
Transfer RNA biogenesis [BR:
calg03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
SH580_14475
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NCBI-ProteinID:
WPJ94638
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Position
3532536..3533696
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AA seq
386 aa
AA seq
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MITTTEALADVVRRAREAGAVGVDTEFIWDRTYYPTLGLVQIGYPDGHCELIDAPAIEDW
SPLAELMSDPDTVKILHDAQQDLNILYRACGGLPKNIFDTQRSSGFVGLSATISLSELLK
TLLKVRLAKTETRSDWVARPLTDAQIKYAEDDVRYSVDLMLKIMGKAEALGRKEWIQDEM
KIYEDVSNYSERDPDYEMPRVRGSGSLTQQQRNVLRALGAWRELKARRRNIPRGFVLSDD
ALVSLVKRPPNSAEDIRQMKGLSERSAERNRGHIWEAIERGRNGDLPELPNHKHIGPSPD
DGYEARVDLSLASIKGMCLADKIDPALIGNRAEVTAFVLEVEGIDPSRHRMLRGWRGEFC
GNALLRLLKGEGSISIDPESKLPQLS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgattaccacaaccgaagcccttgccgatgtcgtgcgccgtgcgcgtgaagccggtgca
gttggcgtcgataccgaatttatttgggatcgcacctattatccgaccttaggtttagta
caaattggctatccagatggccattgtgagctaattgatgcgcccgcgatcgaggattgg
tcgcccttggctgagctgatgtcggaccccgatacggtaaaaattctgcatgatgcgcaa
caagatctcaatatactttaccgcgcctgcggtggcttgccgaagaatatttttgatacc
cagcgcagttcgggctttgtggggctgtcggcgacgatctctttgagtgaattgctaaag
acattgctcaaagtacgcttggcaaagacggagactcgttcggattgggtggcacgtccg
ttaaccgatgcacagattaagtatgctgaagatgatgtgcgctattcggtcgatttgatg
ctgaaaattatgggcaaagcggaggcactcggccgcaaggagtggattcaagacgagatg
aaaatctacgaggatgtgtctaattacagtgagcgcgaccccgattatgaaatgccccgc
gtgcgcggcagtggttcgctcacgcagcagcagcgcaatgtgctgcgtgcgctgggagcg
tggcgtgagttgaaagcccgtcgtcgtaatattccgcgaggctttgtgctttcggacgat
gcattggtgtcactggttaagcgtccgccgaatagcgcggaagatattcgccagatgaaa
ggtttgagcgagcgctctgctgagcgaaatcgcgggcatatctgggaagccatcgaacgc
ggccgaaatggcgatttgccggaattacccaatcacaagcacattgggccatcgccagac
gacggctatgaggcccgggtggatctctccttggcttcgattaagggcatgtgtctcgct
gacaaaattgaccccgcattgattggcaatcgagccgaagtgacagccttcgttttggag
gtcgaaggtatcgacccgagccggcatcgtatgctgcgtggttggcgtggtgaattttgt
ggcaatgctttgctgcgcctgctgaaaggcgagggcagcatctcgattgatcccgaatcg
aagctgccgcagctgagttag
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