Coraliomargarita algicola: SH580_15780
Help
Entry
SH580_15780 CDS
T10130
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
Organism
calg Coraliomargarita algicola
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
LysM3_LYK4_5
LysM1_NFP_LYK
LysM2_CERK1_LYK3_4_5
LysM_RLK
LysM3_NFP
LysM2_NFP
LysM_OapA
Motif
Other DBs
NCBI-ProteinID:
WPJ94890
LinkDB
All DBs
Position
3817300..3818616
Genome browser
AA seq
438 aa
AA seq
DB search
MKVSKVFGCVLGLHFGVIAVLLVQPGCRSQQPPTRTYTQTSTQVSTPSRTLASTPSSGSE
RTMAYNQGRTIKTSVEGASRHTEGLIVAKRVDSEVTGLDAAFNAGFDDGRYAPDSSGSEF
GEFDDIAPIAPLSTGGQTVQVAGDSFETYTVKKGDNLWSIAKRYNISLNELYAANGLNKN
SILKIGQQIQIPVEGGTATVKTVSADTYQPSSFNQASTSYTVKRGDSLSKIASQHNTSVR
AIKAANNMTSDLIRVGDTLILPVEGSSRAAATPAAPSTSSSRSTPAVTYVATTNNVAGGR
THTVKAGEYPATIARKYGMTSGELLALNGITDPRKLQVGQVLKVSGSGSANNVDSRTETV
VAPTAAVNTSASVTRPTTVSTVPAAPITTSSFRPAASTGPVEITVIEADPLVEGEVTDIQ
SDDLFDGAVEIPVIRLEE
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtatctaaagttttcggttgtgttctcggtcttcatttcggtgtgatcgcagtg
ttattggttcagcccggttgccgtagtcagcaaccgcccacgcggacttatactcaaaca
tcgactcaggtatcgacaccttcgcgcactttagctagcacaccgagtagtggttctgag
cgcaccatggcttataatcaggggcgcactattaaaacctctgtggaaggtgcatctcgt
cacactgaaggattgattgtggcgaagcgtgtggactctgaggttactggtttggatgct
gcctttaacgctggctttgatgatggccgttatgcccccgatagctcgggcagtgaattt
ggtgagttcgatgatatcgcaccgatcgcaccactcagcactggtggtcagactgtccaa
gtcgctggcgattcttttgagacctatactgtgaaaaagggcgataacctttggtcgatc
gccaagcgttacaatatctcactcaatgaactttatgcagccaatggtttgaataaaaat
tctattttgaagatcggtcagcaaatccagattccggtcgaagggggcactgcgactgtg
aaaactgttagcgctgacacctatcagccatcctctttcaatcaggccagcacgagttac
accgtgaagcgtggtgactccctctcgaagattgctagccaacacaacacttctgtgcgt
gcgatcaaagctgctaacaatatgacttcagacctgattcgggtaggggatacgcttatc
ctgccggtcgaggggagcagtcgtgctgcagcgacgcctgccgcaccatcaacttccagt
agccgcagcacgcccgctgtcacttacgtggccacgaccaacaatgttgctggtggtcgc
acacacacggttaaagctggagagtatcccgcgacgattgcgcgtaaatacggtatgacc
tccggcgaactcttagcactcaatggcattacagacccccgcaagttgcaagttggtcaa
gtgcttaaagtcagtggatcgggttcggctaacaatgtggactcacgcacagagacggtg
gtcgcacccaccgctgctgtgaatacatctgcatcggttacgcgtccgacaactgtttcg
actgtgccggccgcaccgattacgacatcttcctttcgacctgcggccagcacgggccca
gtggagattactgtgatcgaagccgatcctctggttgaaggggaagtgactgatattcag
tctgacgatttgttcgacggtgcagtcgagatccctgtcatccgcctggaagagtaa
DBGET
integrated database retrieval system
