Coraliomargarita algicola: SH580_16155
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Entry
SH580_16155 CDS
T10130
Name
(GenBank) exonuclease SbcCD subunit D C-terminal domain-containing protein
KO
K03547
DNA repair protein SbcD/Mre11
Organism
calg Coraliomargarita algicola
Brite
KEGG Orthology (KO) [BR:
calg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
calg03400
]
SH580_16155
DNA repair and recombination proteins [BR:
calg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SH580_16155
Archaeal homologous recombinant proteins
SH580_16155
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
WPJ94963
UniProt:
A0ABZ0RIQ8
LinkDB
All DBs
Position
complement(3919757..3920965)
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AA seq
402 aa
AA seq
DB search
MKILHTADWHLGQNFFERDRLEEQSAFLDFLLKQIETRSIDLLIIAGDIFDTANPPRAAE
QLYFDFITRLHALQHCEAVIIGGNHDSAPHLDAPRTVLSHLNIHVIGGMPDQTSDAILRF
ERNGKRLCIAAIPFLRDRDVRRAIEGESFDAMEARTKAGIIQTYQNIAQQIQTSRQDDEV
LLATGHLTAVGGRLSDSERSVHIGNLGSISAEQFPPIFDYIALGHLHHPQAVGACEHIRY
SGSPIPLSFSESSEKEIRLLTIHDDHSLTHQAIDIPLARRLLRLSGSADTVRQAIEELST
PSHELTPWIEVTLTEGDVSPLINDQIRAAAAANDAVVLKVGRKLNNSQISALPDQTTKAI
SEWEPLAVFEKRIESYQGDLSPEALKQCFNHILHAVQEDDAQ
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctgcacacagccgattggcacctagggcaaaactttttcgagcgcgatcgc
ttggaagagcagagcgcatttctcgactttctactcaagcaaatcgagacacgaagcatc
gacctactcatcatcgcaggcgacatcttcgacaccgccaacccaccacgcgcagcagag
caactttacttcgacttcattacacgattacatgcattgcagcactgcgaggcggtcatc
atcggaggaaaccatgactccgctccccatctggatgccccacgcacggtactgtcgcat
ctaaacatccatgtcatcggcggcatgcccgatcaaacaagtgacgcaatcctacgcttt
gaacgcaacggtaaacgcctctgcatcgcagccatccccttcctccgcgaccgtgacgtg
cgccgcgccatcgaaggcgagagctttgatgcgatggaagcccgcaccaaagccggcatc
atacagacctatcaaaatatcgcacaacagatccaaacatctcgccaagacgacgaagtg
ctgctcgccacaggtcacctcactgcggtcggaggtcgtctctctgacagcgaacgctct
gttcacatcggcaacttaggcagtatcagcgcggaacaatttccacccatcttcgactac
atcgcgctcggtcacttacaccacccacaagcggtgggtgcgtgcgaacacattcgttac
tccggcagccccattccgctcagcttctcagagtcctccgaaaaagagattcgcctgctc
accattcacgatgatcacagcctcacacaccaggcgatcgacatacctctagcccgccga
ctactccgcctatctggcagtgccgacaccgtaagacaggccatcgaggagctatccacc
ccctctcacgagctcactccgtggatcgaagtcactttaaccgaaggtgatgtcagccct
ctgatcaacgaccaaatacgcgcagctgccgcggcaaacgatgccgtcgtacttaaagta
ggccgcaagctcaacaactcacaaatcagcgcccttcctgaccaaacaaccaaagcgata
agcgaatgggaaccgctcgctgtttttgaaaaacgaatcgaaagctaccagggagacctc
agcccggaggcgcttaaacagtgcttcaaccacatcctccacgcagtgcaggaggacgac
gctcaatga
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