Coraliomargarita algicola: SH580_16310
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Entry
SH580_16310 CDS
T10130
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
calg Coraliomargarita algicola
Pathway
calg00521
Streptomycin biosynthesis
calg00523
Polyketide sugar unit biosynthesis
calg00525
Acarbose and validamycin biosynthesis
calg00541
Biosynthesis of various nucleotide sugars
calg01100
Metabolic pathways
calg01110
Biosynthesis of secondary metabolites
calg01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
calg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SH580_16310 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SH580_16310 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
SH580_16310 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SH580_16310 (rfbB)
00525 Acarbose and validamycin biosynthesis
SH580_16310 (rfbB)
Enzymes [BR:
calg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
SH580_16310 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
WPJ94992
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Position
3950463..3951563
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AA seq
366 aa
AA seq
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MKILVTGGSGFIGSNLVRLLIEEKGESVINLDKLTYAGNAESLADLSGNPNYTFEQVDLC
DAVALSSVFHKHQPDCVMHLAAESHVDRSIDGPGEFIQTNIVGTFNLLQASLGYWKSLPS
QVPALKSQPAKERFRFLHVSTDEVYGSLAPDALGFSETTPYDPHSPYSASKAASDHLARA
WGDTYGLPVLVTNCSNNYGPFQFPEKLIPVVILKCLRGEPIPVYGKGENIRDWLYVKDHA
EALYSVVTKGRVGETYNIGGNNERQNIELVKMICGLMDELAAQPVTGKLKTEQLKAESLI
TFVTDRPGHDMRYAIDPTKIRDELGWEPKEDFESGFRKTVKWYLDNREWTDRILSGDYQL
DRLGNS
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattttagtcacaggaggttctggttttatcggatccaatttagttcgtcttctt
atagaagagaaaggtgaatcggtcatcaatctcgacaagttgacctatgccgggaatgct
gagtcgctggccgacctctcaggcaatccgaattacactttcgagcaagtggacctttgc
gatgccgtagccctcagctcagtttttcataagcatcaacctgactgtgtcatgcacttg
gcagccgagagtcacgttgatcgttccatcgacggcccgggcgaattcattcagaccaac
atcgttggcacctttaaccttcttcaagcgagtcttggatattggaaatcactaccgtct
caggttccagctctcaagtctcaacctgctaaggaaaggttccgcttcctccacgtctcg
accgatgaagtctacggctcgctcgcgcccgatgcgctcggtttttctgaaaccacgcct
tacgatccgcactctccctattccgcgtcaaaggccgcgtccgatcacctcgcacgtgct
tggggcgacacctacggcttgccggtgctggtcactaattgctccaataattacggcccc
tttcaatttcccgagaaactaatccccgtggtcattctaaaatgtttgcgcggcgagccc
attcccgtgtatggcaagggcgaaaatattcgcgattggctgtatgtcaaagaccacgcc
gaagcactttattcagtcgtcactaaaggtcgagtcggagagacctataacatcggcggc
aacaatgaacgtcaaaacatcgagctggttaaaatgatctgcggcctaatggatgagctg
gctgctcaaccggtcactgggaaactgaaaaccgaacaacttaaggctgaaagcctcatt
acttttgtgactgaccgtcctggtcacgatatgcgttacgctatcgaccccactaaaatt
cgcgacgaactcggatgggaacctaaagaggattttgaatctggcttccgtaaaaccgta
aaatggtatctagataatagagagtggactgatcgtattcttagtggtgattatcaactg
gatcgactcggtaattcgtga
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