Coraliomargarita algicola: SH580_19560
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Entry
SH580_19560 CDS
T10130
Name
(GenBank) alpha-L-fucosidase
KO
K01206
alpha-L-fucosidase [EC:
3.2.1.51
]
Organism
calg Coraliomargarita algicola
Pathway
calg00511
Other glycan degradation
calg04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
calg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
SH580_19560
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
SH580_19560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
calg04147
]
SH580_19560
Enzymes [BR:
calg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.51 alpha-L-fucosidase
SH580_19560
Exosome [BR:
calg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SH580_19560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha_L_fucos
GHL6
Motif
Other DBs
NCBI-ProteinID:
WPJ95619
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All DBs
Position
4775957..4777333
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AA seq
458 aa
AA seq
DB search
MSISKKLSWWTEARYGMSLHFGLYSLAGRGEWVRAQEQMSVEDYQRYFERFEPAPDWAIQ
WARLAKAAGAQYGVLTTKHHDGFCLFDSKLTDYSSMYTPAGRDLVREWVDAMRAEGLKVG
LYYSLVDWHHPDYPAWQDRQHPLRHDSASEHRDRAANWDRYIEYMHGQLIELCSNYGVID
NLVVDFSYWQYTAEKWGATEIQNKLRALQPDMIFNDRWGREARQRLPRATYAGDYEQTEQ
NIPQQCLKDDQGERIPWEGWFTLTNSWSYSATDALWKSPSTIIRTLINCVSKDGNLLINV
CPDGKGIVPAQAVDIMEEVGEWMRSNGESIYGAGASSYAKPEWGRYTQKGRTLYAHLTDQ
PIGNICLPGLRGRVKRGRIVATDTEVRICDYWNPVVQSFDGPDDIFFNFASPTAATYPLP
DARATVVAFELNDDVATQQERERLDTAIQAAMVSRTVM
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgagtatttcaaaaaaactaagttggtggacggaggcacgttatggcatgtctttacac
tttgggttgtattctttggctggtcgcggggagtgggtgcgtgcgcaagagcaaatgtcg
gtcgaggactatcaacggtattttgagcgctttgaacctgcgcctgattgggcgattcaa
tgggcacggttggcaaaagctgccggggcgcaatatggagtgctcacgacaaagcatcat
gatggattttgtctgtttgattccaagttaacggactatagctccatgtacacgcctgcc
ggacgtgatcttgtgcgtgagtgggtcgatgcgatgcgagctgaggggctgaaagtgggt
ttgtattattcattagtggattggcatcatcctgattatccagcttggcaagaccgtcag
catcccttgcgccatgattccgctagtgagcatcgagatcgtgctgccaattgggatcgt
tacatcgagtatatgcacggtcagttgatcgagctatgcagcaactatggagtgattgat
aatcttgtagtcgatttttcttattggcaatacaccgccgaaaagtggggcgcgacagag
attcagaataaattacgtgccttgcaacctgacatgatctttaatgatcgctggggtcgg
gaagcgcgccaacgtttaccacgtgcaacttacgcaggcgattacgagcagacagagcag
aacattccgcagcaatgtttgaaagatgaccagggtgaacgaattccatgggaggggtgg
tttacgctgactaattcctggtcgtattccgcaacggatgccctgtggaagtcaccgagc
acaattattcgcacattgattaattgcgtgtctaaggatggtaatttgttaattaatgtt
tgcccggacggaaaaggcatcgtgccagcccaagctgtggatattatggaggaagtcgga
gaatggatgcgctcgaacggggagtctatttacggagcaggtgcgtcgtcgtatgctaag
ccagagtgggggcgttatacccaaaaggggcgcactctatatgcacatctaactgatcag
cccattggtaacatctgtttgccgggattgcgcgggcgcgtgaaacgagggcgtatcgtc
gctacggataccgaggtgcgaatttgcgactattggaatccggtggtacagagctttgat
gggccggacgatattttctttaattttgcttcgcccactgcggcgacctatccactgcct
gatgcacgtgccacggtggtcgcttttgagctgaatgatgatgtcgccactcaacaagag
cgagagcgcctggatactgcgattcaggctgccatggtcagtcgcactgtcatgtaa
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