KEGG   Coraliomargarita algicola: SH580_19745
Entry
SH580_19745       CDS       T10130                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
calg  Coraliomargarita algicola
Pathway
calg03030  DNA replication
calg03430  Mismatch repair
calg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:calg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SH580_19745
   03430 Mismatch repair
    SH580_19745
   03440 Homologous recombination
    SH580_19745
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:calg03032]
    SH580_19745
   03400 DNA repair and recombination proteins [BR:calg03400]
    SH580_19745
Enzymes [BR:calg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SH580_19745
DNA replication proteins [BR:calg03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SH580_19745
DNA repair and recombination proteins [BR:calg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SH580_19745
SSDB
Motif
Pfam: RNase_T DNA_pol_A_exo1 Voldacs
Other DBs
NCBI-ProteinID: WPJ95655
UniProt: A0ABZ0RHJ0
LinkDB
Position
complement(4820529..4821098)
AA seq 189 aa
MHLIIDTETTGLTPLSFVTERNYKQWPRMVQIAWGLVDEGAIEIDHSALIRPVGFQIPYS
SMRIHGITQTQAEEEGEDLHLQLKMLNKVMQDADTIVAHNLNFDLGIIQSEAMRIGYPIA
FPNKRHCTAYMGQAYLRKEKKQRLADFPSLGELHQQLLGDDYGPKHDALRDVIACASAYE
HLRRLGYAK
NT seq 570 nt   +upstreamnt  +downstreamnt
atgcatctaatcattgacaccgaaaccactggactcacgccactcagttttgtcaccgag
cgtaactataagcaatggccgcgcatggtgcagattgcctggggtctcgttgatgagggc
gcgatagaaatcgatcacagcgccctgattcgccccgtcggttttcaaattccgtacagt
tcaatgcgcatccacggcatcacacaaacacaagccgaagaagaaggcgaagatctccac
ttacagctaaaaatgctgaacaaggtcatgcaggatgcggacaccattgtagcgcacaac
ttaaatttcgacttaggcattatccaaagcgaagccatgcggattggctatcccatcgca
ttccctaataaacgccattgcaccgcctacatgggccaagcctatctacgcaaagaaaag
aagcagcggctggcagacttcccaagtttaggcgaactacaccagcaactactcggtgac
gactacgggcccaaacacgatgccctccgtgacgttatcgcctgtgcaagtgcctacgaa
cacctacgccgactcggttacgcaaaataa

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