Coraliomargarita algicola: SH580_20145
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Entry
SH580_20145 CDS
T10130
Symbol
trpS
Name
(GenBank) tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
calg Coraliomargarita algicola
Pathway
calg00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
calg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SH580_20145 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
calg01007
]
SH580_20145 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
calg03016
]
SH580_20145 (trpS)
Enzymes [BR:
calg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
SH580_20145 (trpS)
Amino acid related enzymes [BR:
calg01007
]
Aminoacyl-tRNA synthetase
Class I (G)
SH580_20145 (trpS)
Transfer RNA biogenesis [BR:
calg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SH580_20145 (trpS)
Prokaryotic type
SH580_20145 (trpS)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
WPJ95734
UniProt:
A0ABZ0RS05
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All DBs
Position
4916996..4918057
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AA seq
353 aa
AA seq
DB search
MSEAKPVILTCAQPTGQLTLGNYLGAIKNWATMLDDYECYFGVVNMHSITVPYTPTDLRK
NTLSCVAQYIACGLDPERSNIFVQSHVIGHTELAWLLSCITPIGDLQRMTQFKEKAAKLG
FNVGEGNDLKFTHEGARAGASVNSGLLMYPVLMAADILLYNADAVPVGNDQRQHLELCRD
LAQRFNHKYSDTFTIPEAFIPKEGARIMSLQDPERKMSKSDDNQNATLYLLDEPSKLKKK
IMSAVTDSGSEIVAGDDKPGVSNLLQIYSAMSGRTVADIEESLKGEGYGTLKKEVADAVI
SVLEPVQAKYHDLIQDKAYLEGVLKSGAEAAQKRAYKVLGKAYRKAGFVERPR
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagcaaagccagtcattctcacctgtgcccaacccactgggcaactgactctc
ggtaactaccttggagccattaagaattgggcgacgatgctcgacgactacgagtgctat
ttcggtgtcgttaatatgcattccatcacggtgccctatacgccgacagatttgcgtaaa
aatacactgtcgtgtgtcgcccaatacatcgcatgcggcttagatcctgagcgctcaaat
atcttcgttcagtcgcacgtgatcggacacaccgagttggcttggttgctcagctgtatc
acacccatcggcgacttgcagcgcatgacgcagtttaaggaaaaagccgctaagctcggc
ttcaatgtgggggaggggaacgacctgaaatttacccacgaaggcgcacgcgccggcgct
tcggtcaactctgggctgctgatgtatcccgtgctgatggcggctgacatccttctctac
aatgccgacgctgtgcccgtggggaacgaccagcgccagcacttggagctctgccgcgat
ctagcgcagcgttttaatcacaaatactctgacacctttaccattcccgaggcgttcatc
cccaaagagggcgcgcgtatcatgtcgctacaagaccctgagcgcaaaatgtcgaagagt
gacgacaatcaaaacgctacgctttacctcctcgacgagccgtccaagcttaagaagaag
atcatgagcgcggtgacggactctggtagtgagattgtcgccggcgacgacaagcccggc
gtttccaatctgctacagatctactccgctatgagcggacgcaccgttgccgacattgaa
gagtcgctgaagggagagggctatggcaccttgaaaaaggaagtcgccgacgcggtgatc
agcgtgctcgaacccgtgcaagcaaagtatcacgacttgatccaagataaagcgtatctc
gaaggcgtgctcaaatctggtgccgaagccgcgcaaaaacgcgcctacaaggtgctgggt
aaagcctatcgtaaggccggctttgtggaacgtccgcgataa
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