Coraliomargarita algicola: SH580_20295
Help
Entry
SH580_20295 CDS
T10130
Name
(GenBank) helicase C-terminal domain-containing protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
calg Coraliomargarita algicola
Pathway
calg03420
Nucleotide excision repair
Brite
Enzymes [BR:
calg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
SH580_20295
Transcription machinery [BR:
calg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
SH580_20295
Chromosome and associated proteins [BR:
calg03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
SH580_20295
DNA repair and recombination proteins [BR:
calg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
SH580_20295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WPJ95764
LinkDB
All DBs
Position
complement(4953575..4955905)
Genome browser
AA seq
776 aa
AA seq
DB search
MQIDPMQRCVRLSVRELAIFRNQPSARGHGHSPWRAAVGQQWHKSAEAMSHAEHSDARFE
VSVNANWQHRDWLFKISGRIDQLLPTTHGFLIREVKTIRSPLPAPDETLIADYSDYFAQA
ATYRSMLELLPEFSDQTITAEGQFINIENGAKQSVLLQSSEHALFEYQLEQLRPFLDERR
SSLNRLRNAQIQAAFQTLRPGQAQLFQTLHQSALQARVVLTQAPTGFGKTGIILEHALKH
MQDGLYDRCIYLSSKSTGQLETIRQLQQMIGHEMRYIQMRNRNEHRIDSERHSCTGDGRC
DLEIDPHWQAAELQIDELFQNGTLDLPRAKEIGAETGICPYSITKACLPFAEIWIGDSNY
IFSPDSRSVFLDALSFDAERTLLIVDEAHNLPERTADSLSIELSSPDLLFAIEELRDHGA
PRNLLATANELCRWIDSLSPEQALTGNQLYMGQDLCEDFANQLTSAAFDYEATAPFAIQL
IWSIPQLAESFAAPAHQFLHWAPRAGLLRATCLDASEWIAECLKPFGGCVMMSATLAPFD
CFRESCGLAKDAVTVAQAQAPWRDEAYNVAIDCRVDTRLRTRERYYETTARTVAEFSYHS
PGVPIVVFFASYQYAENIQTYLAALAPELRVQRQPRGVDLAEQSSFIAECLLTVDVIFLI
LGSSFAEGIDQLGGAVDHIMIVGPALPEVNLIQKTRIENHAGFSREDAFQDIYIRPAMRR
IHQALGRIVRAPGQSARVLLHCRRFAENAYLHELAPEYQSEYQLHNDEALSLWLEA
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcgatccgatgcaacgctgcgtgcggttgagcgtgcgcgaactggcgatattt
cgcaaccaaccaagcgcccgtggccatggccatagcccctggcgagctgcagtcggccaa
caatggcacaagagtgcagaggcgatgagccacgcagagcacagcgatgctcgcttcgaa
gtcagcgtaaatgccaactggcaacatcgcgactggttatttaaaatcagcggtcgcatc
gatcagctattgccgaccacccatggttttctaatcagagaggtcaaaaccatccgcagt
cctctccccgcacctgatgaaacattaatcgcagactactcggactattttgcacaagcc
gccacatatcggtcgatgctagaactgctccccgaatttagcgaccaaacgattactgcg
gaaggacagttcatcaatatcgaaaacggagctaagcaatccgtattgttgcagtcatcc
gaacatgccctgttcgaatatcaactagagcaactgcgcccttttctggatgagcggcgc
agcagcctcaaccgtctacgcaatgcgcagatccaagctgcatttcaaacattacgccca
ggtcaggcacaactcttccaaactttacaccagtctgccctacaggcgcgtgtcgtactc
acgcaagcccccactggctttggtaagacggggatcatcctcgaacatgcactcaaacat
atgcaggatggtctctatgatcgatgcatttatctaagtagtaaatccacggggcaactt
gagaccattcgccaactccagcaaatgatcggtcacgaaatgcgctatattcaaatgcgt
aaccgcaatgagcatcgaatcgatagcgagcgtcatagctgtacgggcgacgggcgttgc
gatcttgaaatcgacccacactggcaggctgcggaactgcaaatcgatgaactcttccaa
aacggtaccctggatctgccccgtgccaaagagatcggagccgaaacagggatctgtccg
tatagcataaccaaagcctgcctgccctttgccgaaatatggattggcgacagcaactac
attttctcccccgacagccgatcggtatttttagacgcgcttagtttcgatgccgaacgt
acgctactgatcgtcgatgaagcgcataacctgcccgaacgcacggccgacagtctaagt
attgaactctccagcccagacttactctttgcgattgaagaactgcgcgaccatggcgca
cctcgcaacttgttagccaccgcaaacgaactctgccgttggattgacagcctgtccccg
gaacaagcgttgacaggaaaccagctctacatgggccaggatctttgcgaagactttgcc
aaccaactcacatcggcagctttcgactacgaagcgaccgctccctttgcgatccaatta
atatggtctattccgcaactagccgagagcttcgcagcgcccgcacatcagtttctccac
tgggcaccacgcgctggactcctgcgtgccacctgtctcgacgccagcgaatggatcgca
gagtgcctaaaaccctttggtggctgcgtcatgatgtcggccacactcgctcccttcgat
tgcttccgtgaaagttgcggactcgcaaaagacgccgtaacggtcgctcaagcacaggca
ccttggcgcgacgaagcctacaatgtagccatcgattgtcgcgtagatacgcgcttacgt
acacgcgaacgctattacgaaacaactgcacgcacggtcgcagagtttagctatcatagt
cccggcgtaccaattgttgtgttttttgcatcctatcaatacgcagaaaatatacaaact
tacctcgcagccttagctcccgaactacgtgtccagcgtcaaccacgtggcgtcgatcta
gcagaacaatcatcattcatcgctgaatgcttactaaccgtggacgttatttttttaatc
ttaggaagtagctttgccgaaggtattgatcaactcggaggtgcagtggatcacatcatg
atcgtcggcccagccttacccgaagtgaacttaatacaaaaaacacgcatcgaaaatcac
gcggggttctcacgtgaggatgcctttcaagacatatatatacgcccagctatgcgacgt
atccatcaagcactcggtcgtatcgtacgagccccgggacaatctgcccgagtgctccta
cactgcaggcgctttgccgaaaacgcctatctgcacgaactcgctcctgaatatcaaagc
gagtatcaactacataatgacgaagcgctatcattatggttggaagcataa
DBGET
integrated database retrieval system
