Coraliomargarita algicola: SH580_21455
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Entry
SH580_21455 CDS
T10130
Name
(GenBank) glycoside hydrolase family 2 TIM barrel-domain containing protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
calg Coraliomargarita algicola
Pathway
calg00052
Galactose metabolism
calg00511
Other glycan degradation
calg00600
Sphingolipid metabolism
calg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
calg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
SH580_21455
09103 Lipid metabolism
00600 Sphingolipid metabolism
SH580_21455
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
SH580_21455
Enzymes [BR:
calg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
SH580_21455
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
LacZ_4
Glyco_hydro_2
Glyco_hydro_2_N2
BetaGal_ABD2
Glyco_hydro_72
BetaGal_gal-bd
Motif
Other DBs
NCBI-ProteinID:
WPJ95987
LinkDB
All DBs
Position
5260235..5263369
Genome browser
AA seq
1044 aa
AA seq
DB search
MLIKKRNLLLSTLLLAALCHSASAVDWEDQSIFRINKEAPRAVSMPFPTAKEAVSLKRLE
SPYAMLLNGDWQFNWVKHPDQRSVDFYKTDYDASSWKTIKVPSNVELEGYGTPIYTNQPY
PFKKNPPFVMTEPPRRFTNFDERNPVSSYRRTVTLPTEWEGRQTFITFNGVNSAFYLWVN
GQKVGYSQDSRTPSEFNITEYLHEGENLLAVEVYRNSDGTYLEDQDFWRLSGIFRDVYLW
SSAPLQLRDYFARGGLTDDYNKGTFSFEADVRNLTSHAVVDYQLEVQLNDLEGKEIFSHS
LKGKTGSTSEFTLEPLDVQFWSAEAPNLYQLIIELKDASGTIVDTYARKVGFSRSEIKDG
QLLVNGQPILIKGVNRHDHDPDTGHYISEERMLQDILIAKRNNINAIRTSHYPNDPRFYE
LCDEYGIYLCAESNIESHGMGYGKDSLAKDPTWQAAHLDRVMNNVEAFKNHPSIIIWSLG
NEAGDGVNFEACSTWIRENEDSRVIHYEGDHAVSHVDFYGPMYDSHQKVVKYAIAQSKKP
LSAQHPVIQCEYSHAMGNSSGGLAEYWDDIHKYRNLQGGFIWDFIDQGLRQTKTVNGVTQ
EFYAYGGDFGDKPNDDNFCMNGILNADREPSPQLQEVKKCYENVFIKNLGAGRLEITSNR
FFTTLDDLELSYGILLNGEGELDKVLALPAIEPGQSAIVEIDLPQFKLKPGVEAVLSIEV
RLKQATSWAEVGHLVTWQQFVLSGDATQVLPEALAPTVTYQQVSGQTIVTGDGFQVRFDD
KTGAIGQLEVSGKSVFVKPLQLNFWRPPVDNDRGSKLLEKSNMWKKAGAQAQVQSAEVKQ
VGNDVILNYQLSIPVGQTTAQLIYKVSAGGAIFADVTVTPKGKNLGPVIPRLGMQAQVSK
DLVNWSWYGHGPDETMLDRQRGARLGKWSLNVADAWYPYSKPQETGNRTGVRFASLRDDA
GAGLIIRGINAPLNMSAYPFAMSELDAGHRHPCDIKTGGVVTLNIDHVQVGVGGVNSWKA
LPLNQHMTKPNKPYRWQFSLRAQP
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgctcattaaaaaacgaaacttactactaagcacgttgctgctagctgcgctttgtcat
tcagcatcagccgttgattgggaggaccagagtattttccgcatcaacaaggaagcgcca
cgcgcggtatcaatgccgttcccgactgcgaaggaagcagtcagtttgaagcgccttgag
tcgccttatgccatgctcttaaacggcgattggcagttcaattgggtgaagcatccagac
cagcggtccgttgatttctacaagactgattatgatgcctcgtcgtggaaaacgatcaag
gtgccatccaatgtcgaactcgaaggctacggcacgccgatctataccaaccagccatat
ccctttaaaaagaatcctcctttcgtgatgacagagccgccgcggcgtttcacgaatttt
gacgagcgcaacccggtgtcctcttatcgtcgcacggtcacgctccccactgagtgggag
ggacgacagactttcatcaccttcaatggtgtcaattcggccttctacctgtgggtcaat
ggacaaaaagttggttattctcaggactcgcgcaccccgtccgaatttaacatcaccgag
tatctgcacgagggcgaaaacctgttggcagtggaagtgtatcgaaattccgacggcact
tacctcgaagatcaagacttctggcgactctccggaatctttcgagatgtctatctctgg
tcgagtgcgcctcttcaactacgcgattatttcgcacgtggtggtcttacggacgactac
aataagggcaccttcagctttgaggctgatgttcgaaacctgaccagtcatgctgtcgtt
gattaccagcttgaggtgcaattgaacgatttggagggcaaggaaatctttagtcattca
cttaaaggaaaaactggcagcactagtgagttcaccttggagccactcgatgtgcaattc
tggtcggccgaagccccgaatctctatcaactgatcatcgaactaaaagatgcctcaggc
acgattgtggatacctatgcacgaaaggtcggcttctcgcgcagtgaaattaaggacggt
caattactcgtcaatggccagcccatcctgatcaaaggcgtcaaccgccacgatcacgat
cccgacacggggcactacatctccgaggagcggatgctgcaagacatcctcattgccaag
cgtaacaacatcaacgccatccgcaccagtcactacccgaatgatccacgattctatgaa
ctctgcgatgaatacggaatctacctctgcgccgagtccaacatcgaatcgcacggtatg
gggtatggcaaagactcactcgctaaagatcccacatggcaagcggcccatctggaccgt
gtcatgaacaatgtcgaggcgttcaaaaatcatccctcgatcatcatctggtcgctcggc
aacgaggcaggagacggtgtcaattttgaggcctgctctacctggatccgtgaaaacgaa
gacagccgagtcatccactacgaaggcgaccatgcggtgagccacgttgatttttacggt
cccatgtatgactcgcatcaaaaagtagttaagtatgcgatcgcccaaagtaagaagccg
ctctcggcacaacatccagtcattcagtgtgaatactcccacgctatggggaactcatcc
ggcggcctcgccgaatactgggatgatattcacaaataccgaaatcttcagggaggcttt
atctgggacttcattgatcagggattgcgccaaactaaaaccgtcaatggcgtgacccag
gaattttacgcctacggcggcgacttcggagacaagccaaacgacgacaacttctgcatg
aacggtatcctcaatgccgatcgcgagccttcgccgcaattgcaggaagtcaaaaaatgc
tacgaaaacgtcttcattaaaaacctaggtgccggccgcttggaaatcaccagcaaccgt
ttctttacgacattggacgaccttgaacttagctacggcatcctgctcaatggggaaggg
gaactcgacaaagtgctcgcgcttcctgcgattgagccagggcagtctgcgatcgtagag
atcgatctacctcagtttaagctcaagccaggcgtcgaagccgtgctctccattgaagtg
cggcttaaacaagcgacctcttgggccgaggtagggcacctcgtgacttggcagcaattc
gtgctctctggagatgctactcaggttctacccgaagctttagctccgaccgtgacctat
cagcaagtgagtgggcagaccatcgtcactggcgacggctttcaggttcgtttcgatgac
aagaccggagccatcggccagctcgaagtttcggggaagtcggtgtttgttaaaccgctg
caactcaacttctggcgtccaccagtagacaatgaccgtggcagtaaacttctcgagaaa
tctaacatgtggaaaaaggccggcgcccaagcacaggtccaatccgccgaagtgaaacaa
gtcggcaacgatgtgattcttaactatcagctgtcgattccggtcgggcaaacgactgct
cagctgatctacaaagtctccgcaggcggcgcgatctttgccgatgtcaccgtcactcca
aaaggtaaaaacctcggaccagtcataccgcgtctaggcatgcaggctcaggtgagcaag
gacttggttaactggtcgtggtatggtcatggcccggatgagacgatgctcgatcgacag
cgcggcgcccgcctcggcaagtggtcgttaaacgttgcagacgcgtggtatccttattcc
aaaccgcaggaaactggcaaccgcactggcgttcgttttgccagcctcagggatgatgcc
ggggctggtctcattattcgcggtatcaatgcaccgcttaatatgtccgcatatcccttt
gcgatgagcgagctcgacgcaggacatcgtcacccttgcgatattaaaacaggcggcgtt
gtcacgctcaacatcgaccatgtgcaagtcggcgtcggaggtgtcaactcctggaaggcg
ttgccactcaaccagcacatgacgaagccgaacaagccgtaccgctggcagttcagtctg
cgcgcacagccttaa
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