Calothrix sp. 336/3: IJ00_01780
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Entry
IJ00_01780 CDS
T03937
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
calh
Calothrix sp. 336/3
Brite
KEGG Orthology (KO) [BR:
calh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
calh03036
]
IJ00_01780
Chromosome and associated proteins [BR:
calh03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
IJ00_01780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
CCDC39
HMMR_N
BRE1
Motif
Other DBs
NCBI-ProteinID:
AKG20205
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All DBs
Position
430163..433828
Genome browser
AA seq
1221 aa
AA seq
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MVHIKRVELTNFKSFGGTTAVPLLRGFTVVSGPNGSGKSNILDSLLFCLGLSGSKGMRAD
RLPDLVNTTQVSKGRSTVEASVTVTFDLSDHVQEEELEVPVSVVEVEETEEIEEEAKEEA
EEEKNRYEKIRAIPGGEWSVTRRLRVTPQGTYTSNYYVNGISCTLTELHGELERLRVYPE
GYNVVLQGDVTSIISMNARERREIIDELAGVAAFDRKIHQAKDTLEEVREKEDSCRIIET
ELQAQCDRLSQDKAKAEKYQKLRTEYLEKQKWEAVLSWRSLQNQQEKLSTQIQAGERQQG
EFTAELTTLNQNILSKNTELDQLNAHVKALGEEELLQVQGILATQDAERKQLERQQQEVT
AAQEDTSRRLQSTQGEISQYQQNITNLTQEGNTARENFVSLQTQRDTAQANLEASRQIAT
EIASASEAWVQQQTALSRQIETLLQTLEPQRTEQAQLGERHDQLQQQIQEQTQLIATLEP
QLGEKERECQALETEFNSSAAPIQTLAETLAATEQELQVQQDTQKRLLQEQRDKQRQLDK
LEAQAQAQQEVQGTGASKVILQSGLPGVCGLVVQLGKVEPRYQMALEISAGARLGHIVVE
DDSIAAAGIELLKQKRAGRATFLPLNRIHTPKFTQDATLRLAQGFVGYAVNLVECDRRYK
DVFAYVFGSTVVFDTLEHARKNLGLYRIVTLDGELLETSGAMTGGSVTQRSALRFGKGES
GESEEVVGLRRRLADIERVLERCNEALTILAPKTKAISQELTEARQKRREQQLQLEQLQK
DIKTIASQLETARSQLQQNQERHTTAQSRLEILHRELPGQEQQLQQYRQELTELEASQTP
QEWQQIQAQIKQQEQQLQQQEILLREAAQRISNQENQQQRLQEKIQEAEQRIIEYEKLRV
NQQNHLESLNSQYSTLTNQITQTRQRLTEMEGKLGEEKQKRDRLEAELRSDLLRQQQLEW
ELEKLQETQTKHREELLTVQTQLQTVSAELPSPLPPVPDKVDLEELQKELRSLAKRLQGM
EPVNMLALEQFERTQKRLEELSQKLQTLEAERTELLLRIENFTTLRQHAFKEAFDAVNEN
FQSIFATLSEGDGYLQLDNPEDPFSSGLNLVAHPKGKPVQRLASMSGGEKSLTALSFIFA
LQRYRPSPFYAFDEVDMFLDGANVERLAKMIKQQAQQAQFIVVSLRRPMIESAERTIGVT
QARGAYTQVLGIKLQSSHTSA
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atggttcatattaagcgcgtggaactgacaaactttaaatccttcggggggacaactgct
gtacctctgttgcggggatttaccgtggtttctggtcccaacggttccggaaaatccaat
atactagactcattattattctgcttaggactttcaggttctaagggaatgcgtgcagat
agacttcctgacttagttaatactacccaggtaagtaagggacgttccacagtcgaagca
agtgtaactgtcacctttgacttatctgatcatgtgcaggaagaagaattagaggttcct
gtctccgtggtggaagtggaagagacggaagaaatagaggaagaagcaaaggaagaagca
gaggaagagaaaaaccgttacgaaaaaattcgcgccattcctgggggagaatggagtgtg
acacgacggttacgggtaactccccagggaacctatacttctaattactatgtgaatgga
atttcctgcaccctgacagaattacatggagagttggagcgtttgcgggtgtatccggaa
ggttacaacgtagtgcttcagggggatgttactagcattatctccatgaatgcgcgggaa
agacgggaaattatcgacgagttagcaggggtagcagcattcgacagaaaaattcaccaa
gccaaggataccctagaggaagttcgggaaaaggaagatagttgtcgaattattgagacg
gaattacaagcacagtgcgatcgcctatctcaagataaagccaaggcggaaaaatatcaa
aagttacgcacagaatatttagaaaagcagaaatgggaagccgttttatcctggcgatcg
ttgcaaaatcagcaggaaaaactttctacccaaatccaagcaggagaaagacagcaaggg
gaatttactgcggaattaactaccctcaatcaaaatattctcagtaaaaatacagaatta
gaccaacttaacgcccatgtcaaagccctgggagaggaagaactgttacaagtacagggc
attctcgccacccaggatgctgaacgcaaacagttagagcgtcaacaacaggaagtcaca
gctgcccaggaagacacaagcaggcgtttacagtcaactcaaggcgaaattagccaatat
cagcaaaatattacgaacctcacccaggaaggaaatacagctagggaaaattttgtctcc
ctccaaacccaacgggataccgcccaagccaacctggaagcttctcgacaaatcgccaca
gaaatagcttccgcttccgaagcctgggtacaacaacaaactgccctgagtcggcaaatt
gaaaccttactgcaaaccctggaaccccaacgcaccgaacaagctcaactgggagaacgt
cacgaccagcttcagcaacaaattcaggagcaaacccaactcattgccaccctagaacca
cagttaggggaaaaggaaagagaatgtcaagctttagaaacagaatttaatagttctgcc
gctcccatccaaacccttgcagaaaccctcgcagctacggagcaggaattacaagttcaa
caagacacccagaaacgcttactccaggaacaacgagacaagcaacgtcaactcgataaa
ttggaagcacaagcacaagcacaacaggaagttcagggaacaggagccagtaaggtcatc
ttacaatcaggtttaccaggtgtgtgtggcttggtggtacagttagggaaggtagaaccc
cgttaccaaatggctttggaaatttccgccggggcgcgcctagggcatattgttgtggaa
gatgatagtattgcggctgccggaattgagctattgaaacagaaacgggcaggtagggca
acctttttacccttaaatagaattcatacacccaaatttacccaggatgctaccctccgt
ctagctcagggtttcgtcggctatgcagtcaatttggtagagtgcgatcgccgttacaaa
gatgtctttgcctacgttttcggcagcacagtagtatttgacaccctagaacacgctcgt
aaaaacctcggtttatatcgcattgtcaccctagatggggaacttttggaaaccagtgga
gcgatgacagggggaagcgtcacccagcgttctgctttgcgttttggtaagggggagagt
ggagaatctgaggaagttgtgggattaagaaggcgcttggcagatattgagcgagtttta
gaacgttgcaacgaagccttaactatcctagctccgaaaaccaaggcaatttcccaggaa
ttaaccgaagctcgtcaaaaacgtcgcgaacagcaattacaactggaacagttacaaaaa
gacatcaaaaccattgccagtcagttagaaacagcgcgatcgcaactccaacaaaaccaa
gaacgccacaccaccgcccaatctcgtctcgaaatcctccaccgggaattaccaggacag
gagcagcaattacaacaatatcgccaggaacttactgagctagaagcctcccaaaccccc
caggaatggcaacaaattcaggcacaaattaaacagcaagagcaacaattgcaacaacag
gaaattctcctccgggaagctgcccaacgcattagtaaccaggagaatcaacagcagagg
ttacaggaaaaaattcaagaagcagagcaaagaattattgagtatgaaaaattgcgagtc
aatcagcaaaatcatctagaaagtttaaactcccaatattccaccctgacaaaccaaatc
acccagacaaggcaacgtctgacagagatggaaggtaaactaggggaagaaaaacaaaag
cgcgatcgcctagaagcagaattgcgctccgacttactgcgtcaacaacaactggaatgg
gaacttgaaaagctgcaagaaacccaaaccaagcaccgagaagaactcctcaccgtgcaa
acccaactccaaaccgtttccgcagagctaccttcccccctccccccagtccccgacaag
gtagacttagaagaactccaaaaagaactccgcagccttgccaagcgtctccaagggatg
gaaccagttaatatgctggcactagaacaatttgaacgcacccagaaacgtctcgaagaa
cttagtcaaaaattacagacattagaagccgaacgcacggaactattgttaagaattgaa
aactttaccaccctacgacaacacgcattcaaagaagcattcgacgcagtcaatgagaac
ttccaatcgatttttgccaccctttccgaaggtgacggctatttacaattagacaaccca
gaagacccctttagtagcggtttaaacctagttgcccatcccaagggtaaaccagtacaa
cgcctagcttccatgtcaggaggcgaaaaatccctcacagctctcagttttatcttcgcc
ctgcaaagataccgcccctcccctttctacgctttcgacgaggtagatatgttcctagat
ggagcaaacgtagagcgattagctaaaatgattaagcaacaagcgcagcaagcacaattt
atagttgtgagtttgcgccgtccgatgatagaatcagccgaacgcacaatcggcgttact
caagcaaggggagcttatacccaagttttaggtatcaagttacaatcatcccatacaagc
gcttga
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