Calothrix sp. 336/3: IJ00_03550
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Entry
IJ00_03550 CDS
T03937
Name
(GenBank) ATPase AAA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
calh
Calothrix sp. 336/3
Pathway
calh03420
Nucleotide excision repair
calh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
calh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IJ00_03550
03430 Mismatch repair
IJ00_03550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
calh03400
]
IJ00_03550
Enzymes [BR:
calh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IJ00_03550
DNA repair and recombination proteins [BR:
calh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IJ00_03550
MMR (mismatch excision repair)
Other MMR factors
IJ00_03550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
DEAD
AAA_30
Viral_helicase1
DUF1978
ResIII
AAA_22
Terminase_6N
Phage_Arf
Motif
Other DBs
NCBI-ProteinID:
AKG20510
UniProt:
A0A0T7BN54
LinkDB
All DBs
Position
complement(886329..888644)
Genome browser
AA seq
771 aa
AA seq
DB search
MTTNFLSHLNPSQRRAVEHFCGPLLVVAGAGSGKTRALTYRIANLILQHRVDPENILAVT
FTNKAAREMKERIQKLFAEQLALSEYGEKFDLLPEHQQTQLRSQVWRHYIKDLWCGTFHS
LLSRILRLDIEKYQDERGRTWNRNFSIFDDSDAQSLVKEIVTKQLNLDDKKFEPRSVRYT
ISNAKNQGLSPQEFAKEQPNYRGRVISEVYSLYQDKLAENNALDFDDLILIPVRLFQQNE
HVLGYWHRKFCHILVDEYQDTNRTQYDLISLLATHGETNKKQWNWNNRSVFVVGDADQSI
YSFRMADFTILLDFQQDFGDGLEDEGTDTMVKLEENYRSCENILQAANHLIENNTQRIDK
VLKATRGAGEQIFFFKADDEIAEAEFVIQQIRNLERQNPEIHWGNFAILYRTNAQSRPFE
DILVRNQIPYTVVGGLKFYDRKEIKDVLGYLRAIANPADTLSLMRVINTPRRGIGKATID
NLVNASQELGVTLWEILSDETSVNTLAGRSAKSVNGFAKMIDKWRNQLDTTPVPELLQGI
LEDSGYVTDLQTQGTDEAEDRLQNVQELYNATLQFAEENEEVSLQNFLSSTALSSDLDNL
KEGETAVSLMTLHASKGLEFPIVFLVGLEQGLFPNYRSMNDPKALEEERRLCYVGITRAQ
ERLFLSHARERRLYGSREPAMRSQFLDELPPELLTSGYKVQRVAKSTSANFRQATNSDTW
AVGDKVLHKTFGLGEITHVFGVGNKVSVAIKFASLGQKIVDPRVAQLQKMG
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgaccacaaatttcctaagccatcttaaccctagtcaacgccgtgctgttgagcatttt
tgtggacctttgttagtcgttgcgggtgcaggttctggcaaaacaagggcacttacctat
cggatcgccaatctgattttacaacatcgggttgacccagagaatatcttggcggtaact
tttaccaacaaagctgcacgggaaatgaaggagcggatccaaaaattgtttgccgagcag
ttagctctgtctgagtatggggaaaagttcgatttattaccagaacatcaacaaactcag
ttgcgatcgcaggtgtggcgacattatatcaaagacttgtggtgtggcactttccatagt
cttttgtcgcggattctccgcttagatattgagaagtatcaggatgaacgaggacgtact
tggaaccgtaatttttcgatttttgatgatagtgatgctcaaagtttagttaaggagatt
gtcaccaagcagttaaatttggatgacaagaaatttgaacctcgttctgtacgctacacc
attagtaatgccaaaaaccagggtttatcaccccaggaattcgccaaggaacagccaaat
tatcggggtagggtaatttcggaagtttacagcttatatcaagataaattggcagaaaat
aatgccctggattttgatgatttaatcttgattcctgtgaggttatttcaacagaatgag
catgtcttggggtattggcatcggaaattttgccatatcttggtagatgaatatcaagat
actaatcgcacccaatatgatttaattagcttgctggctacccacggagaaactaataag
aaacagtggaattggaataaccgttctgtgtttgtggtgggagatgctgaccaatcgatt
tattcttttagaatggctgactttaccattcttctagactttcagcaagattttggggat
ggtttagaggatgaaggtacggatacgatggtgaaattagaagagaactatcgttcctgt
gaaaatatccttcaagctgctaaccacttgattgaaaataatacccaacggattgataag
gttctgaaagcaacgaggggagcaggggaacaaatcttctttttcaaagcagatgatgag
attgcagaagcagaattcgttatccagcaaattcgtaatctagaaagacaaaatccagaa
attcactggggtaattttgccattctataccgtactaatgcccaatctcgaccctttgaa
gatattctcgtacgcaatcaaattccctacaccgtggtgggaggtttaaaattttacgat
cgcaaggaaattaaggacgttctcggttatttgcgggcgatcgccaaccccgcagatacc
ctaagtctgatgcgggtaatcaatacaccccgtcgcggtatcgggaaagcaaccattgat
aacctggtaaatgcatcccaggaactaggtgtcaccctgtgggaaatactcagcgacgaa
acatctgttaataccctagctgggcgatcggctaaatctgtcaatggatttgctaaaatg
attgacaagtggcgtaatcaactagatacgactcccgtaccagagctactgcaagggatt
ttagaggattctggttatgtcacagacttgcaaacccagggaacggacgaagcggaagat
aggttacagaacgtccaggaattgtataatgcgacattgcaattcgccgaagaaaacgaa
gaagtttctctgcaaaacttcctttccagtaccgcacttagttccgatttagataacctc
aaggagggagaaactgcggtttccttgatgactctccacgcatccaaggggctagaattc
cccatagttttcctggtagggttggaacagggattattccctaattatcgctccatgaat
gacccaaaagccttggaagaggaacgcagactttgttatgtgggaattacccgcgctcaa
gaacggttgtttctctcccacgcacgggaaagacgcttgtatggttcacgggaacccgca
atgcgatcgcagtttcttgatgagttacccccagagttgctgacttctggttataaagtg
cagcgagtcgccaaaagcacatcagcaaatttcagacaggcaacaaatagtgatacctgg
gcggtgggagataaagtgttacataaaacatttggattgggtgaaattacccatgtattt
ggtgtggggaataaggtttctgtggcaattaaattcgccagcttaggacagaagattgtt
gaccccagggtagcacagttgcagaaaatgggttag
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