Calothrix sp. 336/3: IJ00_04450
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Entry
IJ00_04450 CDS
T03937
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
calh
Calothrix sp. 336/3
Brite
KEGG Orthology (KO) [BR:
calh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
calh03016
]
IJ00_04450
Enzymes [BR:
calh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
IJ00_04450
Transfer RNA biogenesis [BR:
calh03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
IJ00_04450
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
MCD_N
DNA_pol_B_2
Motif
Other DBs
NCBI-ProteinID:
AKG24444
UniProt:
A0A0T7BZJ7
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All DBs
Position
complement(1111782..1112411)
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AA seq
209 aa
AA seq
DB search
MTLADFQVCDSDLSQTALSQYLQSEAIAVDTETMGLIPQRDRLCLVQLCNESGQVTAIRI
LKGQTQAPNLKTLLEAKNITKIFHFARFDLATLRYHLGIWVNPFFCTKIASKLVRTYTPR
HGLKDVVLELERIELDKSAQTSDWGNAANLTEAQLSYAANDVRHLINVRQKLIGMLQREE
RLELVEECFQCLPTIVSLDLLQFKDLFEH
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgaccttagctgattttcaagtttgtgattctgatttgagtcaaacagctctatcccaa
tatctccaatcagaggcgatcgctgttgatacggaaaccatgggattgattccccagcgc
gatcgtctgtgtcttgtacaattatgtaatgaatctggacaggtgacagctattcgtatc
ctcaagggacaaactcaggctcccaacttgaaaaccctcctagaagccaaaaatatcacc
aaaatctttcattttgcccgcttcgacttagcaactctgcgttatcacctcggtatttgg
gtaaatccgtttttctgtaccaagattgctagcaagttagtacgtacctacaccccccgt
cacggactaaaggatgtggttttagaattagaaagaattgaattagataaaagcgctcaa
acttctgactgggggaatgcagcaaatttaactgaagctcaattaagctatgctgctaat
gatgtgcgtcatttaattaatgtgcgacaaaaattaatcgggatgctgcaacgagaagaa
cgtttagaactagttgaggaatgttttcaatgtttaccaacaatagtttccctcgatttg
ctgcaatttaaggatttatttgagcattaa
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