Calothrix sp. 336/3: IJ00_05235
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Entry
IJ00_05235 CDS
T03937
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
calh
Calothrix sp. 336/3
Brite
KEGG Orthology (KO) [BR:
calh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
calh03009
]
IJ00_05235
Enzymes [BR:
calh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
IJ00_05235
Ribosome biogenesis [BR:
calh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
IJ00_05235
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AKG20790
LinkDB
All DBs
Position
complement(1330902..1331552)
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AA seq
216 aa
AA seq
DB search
MTDHKYILFYKPYGVLCQFTQEIPEQITLKDYIPIPNVYPVGRLDWDSEGLLLLTNHGQL
QHRLCDPQFHHERTYLAQVERIPDVTALQKLVSGVDIKGYRTRPAKVRLLSEEPSLPERN
PPIRFRKNVPTAWLKLTLTEGKNRQVRRMTAAVGFPTLRLVRISIAHLHLDKLQPGEWRS
LTSTELDSLRELVFTNTAPKGKNWRGSTKASSKLKK
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccacaaatatatacttttctataaaccctatggtgtgctgtgtcagttcacc
caggaaattccagagcaaatcaccctcaaggattatattcctatccccaatgtctatcct
gtgggacgtttggattgggatagtgaaggcttgttattgttgacgaatcatggacaatta
caacatcgtttgtgcgatccacaatttcaccacgaacgtacctatttagctcaggtagaa
cggattcctgatgtgactgctttacaaaagttagtgtcgggagtggatataaaaggctac
cgcactcgccctgcgaaagtacgactactttcagaagaaccttccttaccagaaaggaat
ccaccaattcgctttcgcaaaaacgtgcccacagcttggttaaaattaacactaactgag
ggaaaaaatcgccaggtgcggaggatgactgcggcggtgggttttccgactttacgttta
gtcagaatcagtattgctcatttacatttagacaaattacaaccgggagagtggcgatcg
ctcacctcaacagaattagactcattacgagaactggtgtttacaaatactgcacccaaa
ggaaaaaactggcgtggctctaccaaagcatcatcaaagctgaaaaagtaa
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