Calothrix sp. 336/3: IJ00_05825
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Entry
IJ00_05825 CDS
T03937
Name
(GenBank) group 3/4 sigma-70 RNA polymerase sigma factor
Organism
calh
Calothrix sp. 336/3
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r4_2
MarR_2
Phage_antitermQ
Sigma70_r2
HTH_Crp_2
HTH_23
Sigma70_ECF
DUF1492
MarR
GerE
DNA_pol3_delta_C
HTH_38
HTH_40
HTH_11
HTH_10
Mga
Motif
Other DBs
NCBI-ProteinID:
AKG20884
UniProt:
A0A0T7BP74
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Position
complement(1477874..1479073)
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AA seq
399 aa
AA seq
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MRPRQNITELFSTFLQFTDDRFAGWTTDARLHRSIKVCVNQYPEATGEDFWAVYWHKSWQ
KSPQPAIPLGHMSAYLQESCYWTVHNLMPRLPDSHDKVSDFFQVAIASVPKILKSCDPDV
NLSLKAYASRAFGNIIRDYLRQNREADFCNHWGLLMKVSRKRLTESLENAGLNPATIEQY
VLAWTCLTTIHLPRKSPNLRQTPAPEPSTWMAIASNYNRMRLQLTSPGAEVTAPTLEKWL
IECGTQVRKYLYPSVSSLNSPKPGQEEGQLQDELVDALQQPLLTELIEREEEITRQAQKA
QINKVLQAAITQLDTSAQQLLQLYYQKGLTQQQIAKELAIQQYTVSRKLSKARESLLLIL
TRWSQETLHIPITSDVVKYISTILEEWLQVHYQTSSPTP
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcctcgtcaaaatatcactgaacttttttctacctttttacagtttacagatgat
cgctttgcaggttggacaaccgatgcaagactacaccgcagtatcaaagtctgtgttaac
caatatccggaagcaactggggaagatttttgggcagtttattggcacaaatcttggcaa
aaatccccacaacctgcaattcccctaggacatatgtctgcttatttgcaagaatcctgt
tattggactgtgcataatttaatgccacgcttgccagattcccatgataaggtatcagat
ttttttcaagtggcgatcgcctctgtaccgaaaattctcaaaagttgcgatcccgatgtc
aatctcagcctcaaagcctatgcaagcagagcttttggtaatattattcgggattattta
cgccaaaaccgcgaagctgatttttgtaatcactggggtttattaatgaaagtcagccgc
aaacgcttgacagaatccctagaaaatgctggactaaatcccgcaactatagaacagtat
gtcctagcttggacttgtttgactaccatccatttaccacgcaaatccccaaacctacgg
caaactcccgcaccagaacctagtacttggatggcgatcgcgagcaattacaaccgtatg
cgtctccaactcacatccccaggagcggaagtaactgcccccaccttggaaaaatggtta
atcgaatgcggcactcaagtgcgtaaatatttatatccctcagtatcatccctcaattcc
cccaaaccaggacaggaggaaggacaattacaagatgaacttgtggatgctttgcaacaa
cccctattgacagaattaattgaacgagaagaggaaatcacacgtcaagcacagaaagca
caaattaacaaagtgttacaagctgccattactcaactcgatactagcgcccaacaatta
ctgcaactttattaccaaaaaggcttaacacaacagcaaattgccaaggaattggctatc
caacaatacacagtctcccggaaattatccaaagcacgggaatcattattacttatcttg
acccgttggagtcaggaaaccttgcatattcccatcacttccgacgtggttaagtatatc
agcaccatactagaggaatggttgcaggtgcattaccaaacatcatccccaactccataa
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